EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02280
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02280
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02280"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "African Caribbean in Barbados"}, {"TAG": "family id", "VALUE": "BB23"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02280
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02280
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02280-46c-2_S14_L003_R1_001.fastq.gz", "size": "12205616122", "date": "2024-09-10 04:00:02", "md5": "e295190656e3242a380b1d7b853352dd", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02280-46c-2_S14_L003_R2_001.fastq.gz", "size": "12998131300", "date": "2024-09-10 04:00:41", "md5": "bdeabd775457a6d0d8ffddb1da4debfb", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613649", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613649/SRR30613649", "size": "16849982618", "date": "2024-09-10 04:04:40", "md5": "f24517c944c6728d130462e616700a70", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613649.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613649/SRR30613649.lite.1", "size": "12180676166", "date": "2024-09-10 04:40:33", "md5": "d18c9099900c609f2f71f2f99fac2e72", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]