EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG01981
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG01981
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG01981"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Peruvian in Lima, Peru"}, {"TAG": "family id", "VALUE": "PEL27"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG01981
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG01981
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG01981-51d-2_S2_L003_R1_001.fastq.gz", "size": "20637813897", "date": "2024-09-10 04:58:15", "md5": "43971f48adea35c6e9d7af1053243e4f", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG01981-51d-2_S2_L003_R2_001.fastq.gz", "size": "24722263883", "date": "2024-09-10 05:04:09", "md5": "ec92ac32be90adad8c461ca6ba34473d", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613924", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613924/SRR30613924", "size": "30866725692", "date": "2024-09-10 05:25:16", "md5": "ccb1445d80286281fabb71cd529af8ef", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613924.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613924/SRR30613924.lite.1", "size": "20376977920", "date": "2024-09-10 06:26:45", "md5": "817b0218a68c1a1915234541dd72c6c6", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]