EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG01981
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG01981
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG01981"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Peruvian in Lima, Peru"}, {"TAG": "family id", "VALUE": "PEL27"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG01981
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG01981
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613727.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613727/SRR30613727.lite.1", "size": "21511736131", "date": "2024-09-10 06:35:55", "md5": "864576a01cc2e7d470e994c1449f333f", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613727", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613727/SRR30613727", "size": "31705123567", "date": "2024-09-10 05:22:12", "md5": "e5c90775634b1ef54c0a07e24ee5d6ad", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG01981-51d-1_S1_L001_R2_001.fastq.gz", "size": "25149400835", "date": "2024-09-10 04:57:05", "md5": "9f554dfa707ce82c5f804755ba0a7589", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG01981-51d-1_S1_L001_R1_001.fastq.gz", "size": "21655051409", "date": "2024-09-10 05:02:36", "md5": "823893f3a56dbd4cf7c0c47e4a1d5147", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]