EXPERIMENT_TITLE: GSM7611930: intact Hi-C from CD14-positive monocyte (ENCLB115NEZ); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS451PTV
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS451PTV"}, {"TAG": "sample type", "VALUE": "primary cell"}, {"TAG": "cell type", "VALUE": "CD14-positive monocyte"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "dev_stage", "VALUE": "adult"}, {"TAG": "age", "VALUE": "30 year"}, {"TAG": "donor ID", "VALUE": "ENCDO544CHQ"}, {"TAG": "lab", "VALUE": "Yijun Ruan, JAX"}, {"TAG": "source", "VALUE": "AllCells"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS451PTV
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS451PTV
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF503HPK.fastq.gz", "size": "99101701117", "date": "2023-08-06 15:35:13", "md5": "0d45fadae6b4da0b462da8bee1a4b82d", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419642", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419642/SRR25419642", "size": "76839004997", "date": "2023-08-06 15:58:17", "md5": "3075042adf26ea97d92b06e7fa5289b6", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419642.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos4/sra-pub-zq-7/SRR025/25419/SRR25419642/SRR25419642.lite.1", "size": "39276635355", "date": "2023-08-11 17:35:21", "md5": "fc62d1273f6a70bc55fd6950e27b32f7", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]