EXPERIMENT_TITLE: GSM6043924: donor_1.HiC; Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: none provided by the submitter
STUDY_DESCRIPTOR_STUDY_ABSTRACT: 3D chromatin structure of endometrial organoids and PRKO and Sox17cKO mouse uterus Overall design: HiC of endometrial orgaoids treated with estrogen and progesterone and ovariectomized uterus from progesterone receptor-null (PRKO) and PR-CrexSox17-flox mice 1 hour after treatment with V or progesterone
SAMPLE_TITLE: donor_1.HiC
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "source_name", "VALUE": "uterine epithelial cells"}, {"TAG": "treatment", "VALUE": "E2+MPA"}, {"TAG": "tissue", "VALUE": "uterine epithelial cells"}]
Pool_Member_@attributes_sample_title: donor_1.HiC
RUN_SET_RUN_Pool_Member_@attributes_sample_title: donor_1.HiC
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR18753549.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-zq-22/SRR018/18753/SRR18753549/SRR18753549.lite.1", "size": "27173133342", "date": "2022-09-07 07:48:03", "md5": "0da4e19dd414aff3724a2ed13ab76dcc", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR18753549", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR18753549/SRR18753549", "size": "33509597158", "date": "2022-04-15 10:44:53", "md5": "b90a0346705c7dfa9341957a349fa4c7", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "NOVA0237.1-N508-Hi-C_20210325_100502.L001.2.fastq.gz", "size": "32553363332", "date": "2022-04-15 10:38:47", "md5": "f8f431ece39eb38736b774b64b789816", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "NOVA0237.1-N508-Hi-C_20210325_100502.L001.1.fastq.gz", "size": "31537037533", "date": "2022-04-15 10:36:25", "md5": "bf11e17fcc8dc2bdc0848f901e707019", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]