EXPERIMENT_TITLE: GSM7610387: intact Hi-C from Calu3 (ENCLB373FOD); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS151RPO
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS151RPO"}, {"TAG": "sample type", "VALUE": "cell line"}, {"TAG": "cell line", "VALUE": "Calu3"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "health state", "VALUE": "Lung adenocarcinoma"}, {"TAG": "dev_stage", "VALUE": "adult"}, {"TAG": "age", "VALUE": "25 year"}, {"TAG": "donor ID", "VALUE": "ENCDO109DGE"}, {"TAG": "lab", "VALUE": "Mats Ljungman, UMichigan"}, {"TAG": "source", "VALUE": "ATCC"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS151RPO
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS151RPO
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419552.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos4/sra-pub-zq-3/SRR025/25419/SRR25419552/SRR25419552.lite.1", "size": "23582506304", "date": "2023-08-09 07:39:54", "md5": "74b1f636466d3d83488b0afeba3a942e", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419552", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419552/SRR25419552", "size": "53868840414", "date": "2023-08-04 06:02:45", "md5": "da528e8ea9e74648fa8bb84c5fbce72e", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF403LVD.fastq.gz", "size": "58852726235", "date": "2023-08-04 05:55:04", "md5": "1b2d433e87f0820a24c26c897ac6fdc9", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]