EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG03050
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG03050"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "NHGRI Sample Repository for Human Genetic Research at the Coriell Institute"}, {"TAG": "collection_date", "VALUE": "2021-06-02"}, {"TAG": "geo_loc_name", "VALUE": "Gambia"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "GAMBIAN"}, {"TAG": "family_id", "VALUE": "GB113"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null], "@attributes": {"cluster": "public", "filename": "HG03050-1_S2_L001_R1_001.fastq.gz", "url": "https://sra-pub-src-2.s3.amazonaws.com/SRR30310840/HG03050-1_S2_L001_R1_001.fastq.gz.1", "size": "105606707324", "date": "2024-08-22 01:59:29", "md5": "fe37c1fdb8d5ffa8d275def7cf3e7fa3", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": [null, null], "@attributes": {"cluster": "public", "filename": "HG03050-1_S2_L001_R2_001.fastq.gz", "url": "https://sra-pub-src-2.s3.amazonaws.com/SRR30310840/HG03050-1_S2_L001_R2_001.fastq.gz.1", "size": "109468476603", "date": "2024-08-22 02:25:43", "md5": "5c528f11c8611e51713072a1f80fa7ea", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]