EXPERIMENT_TITLE: GSM7657958: intact Hi-C from endothelial cell of umbilical vein (ENCLB541QYB); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS045DGX
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS045DGX"}, {"TAG": "sample type", "VALUE": "primary cell"}, {"TAG": "cell type", "VALUE": "endothelial cell of umbilical vein"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "dev_stage", "VALUE": "newborn"}, {"TAG": "donor ID", "VALUE": "ENCDO628LXZ"}, {"TAG": "lab", "VALUE": "Mats Ljungman, UMichigan"}, {"TAG": "source", "VALUE": "Lonza"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS045DGX
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS045DGX
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF482HVM.fastq.gz", "size": "200882374943", "date": "2023-08-13 00:03:44", "md5": "1bf30a7da4e2f9e1b0e619a34568f45a", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419979", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419979/SRR25419979", "size": "155063527825", "date": "2023-08-13 01:00:34", "md5": "8344710825a71e5cf1400e5704b029ba", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419979.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos1/sra-pub-zq-38/SRR025/25419/SRR25419979/SRR25419979.lite.1", "size": "81133694080", "date": "2023-08-18 04:47:29", "md5": "e378cbb25d5aa766fb105f5238c3a461", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]