EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02602
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02602
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02602"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Punjabi in Lahore, Pakistan"}, {"TAG": "family id", "VALUE": "PK09"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02602
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02602
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02602-11a-2_S12_L002_R1_001.fastq.gz", "size": "20207988961", "date": "2024-09-10 04:16:31", "md5": "0a5b973ee897d423067107d246ff2bb7", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02602-11a-2_S12_L002_R2_001.fastq.gz", "size": "20017902493", "date": "2024-09-10 04:15:49", "md5": "dbfe1c490adfe86683826bf41d1b5dd3", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613635", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613635/SRR30613635", "size": "27180758705", "date": "2024-09-10 04:21:46", "md5": "73ca75aa800c5bcb73187d29f97f479a", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613635.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613635/SRR30613635.lite.1", "size": "19250077749", "date": "2024-09-10 04:44:38", "md5": "0aa745d382f37eb36db3eeabc623b7c7", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]