EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02451
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02451"}, {"TAG": "age", "VALUE": "No data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "African Caribbean in Barbados"}, {"TAG": "family id", "VALUE": "BB46"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30310855.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30310/SRR30310855/SRR30310855.lite.1", "size": "19951555286", "date": "2024-08-22 03:19:01", "md5": "d7f1c3b126bfa0ed0e88c6876a8a697d", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30310855", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30310855/SRR30310855", "size": "31206250294", "date": "2024-08-22 01:10:37", "md5": "81e402b041a1f05e4d2903131bec0a1f", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02451-1_S2_L004_R2_001.fastq.gz", "size": "23583025240", "date": "2024-08-22 01:03:58", "md5": "0847fada83d96d64b0e23e56bec3ac06", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02451-1_S2_L004_R1_001.fastq.gz", "size": "22663300607", "date": "2024-08-22 01:02:49", "md5": "0254c6e1e4d2023988942ca1a7ac8f81", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]