EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02683
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02683
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02683"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Punjabi in Lahore, Pakistan"}, {"TAG": "family id", "VALUE": "PK16"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02683
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02683
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02683-44a-1_S15_L001_R1_001.fastq.gz", "size": "7748565333", "date": "2024-09-10 04:01:30", "md5": "0c40d2c302a28901e49a79cba34a2f64", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02683-44a-1_S15_L001_R2_001.fastq.gz", "size": "8210061953", "date": "2024-09-10 04:00:43", "md5": "517731c03b6fa6a0a69d3d8a2e8cbb51", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613886", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613886/SRR30613886", "size": "10612957354", "date": "2024-09-10 04:02:51", "md5": "65811f26ad2488c56ecf6592366f13c6", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613886.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613886/SRR30613886.lite.1", "size": "7633283230", "date": "2024-09-10 04:47:36", "md5": "b20cfb82c10b799b756fab5057d3c095", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]