EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02698
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02698
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02698"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Punjabi in Lahore, Pakistan"}, {"TAG": "family id", "VALUE": "PK21"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02698
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02698
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02698-18b-2_S20_L001_R1_001.fastq.gz", "size": "3435710501", "date": "2024-09-10 03:42:57", "md5": "2d9117497fba62d1d0fc26786b0ae649", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02698-18b-2_S20_L001_R2_001.fastq.gz", "size": "3499042116", "date": "2024-09-10 03:42:48", "md5": "d1141e79369cfc62755fee7edc148371", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613779", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613779/SRR30613779", "size": "4630385938", "date": "2024-09-10 03:43:30", "md5": "83d93817864388d1ca0ad4ebc3ff1a3e", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613779.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613779/SRR30613779.lite.1", "size": "3215134430", "date": "2024-09-10 04:41:34", "md5": "df6d2df938ac5ec9549f0d89a49c500f", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]