EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG01884
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG01884
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG01884"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "African Caribbean in Barbados"}, {"TAG": "family id", "VALUE": "BB03"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG01884
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG01884
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG01884-49d-1_S5_L004_R1_001.fastq.gz", "size": "17172982862", "date": "2024-09-10 04:37:33", "md5": "17b2ed4c140ae117c7c899745564fa03", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG01884-49d-1_S5_L004_R2_001.fastq.gz", "size": "20541527032", "date": "2024-09-10 04:42:43", "md5": "72c2bfabdce47606c3bc37d5be124987", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613809", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613809/SRR30613809", "size": "25731319116", "date": "2024-09-10 04:58:45", "md5": "49f5f9d20b4e86228f8b383285f02409", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613809.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613809/SRR30613809.lite.1", "size": "16744370500", "date": "2024-09-10 06:28:35", "md5": "a5aa47dc4ffcac854b00f8a9b3a52cac", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]