EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02074
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02074
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02074"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Kinh in Ho Chi Minh City, Vietnam"}, {"TAG": "family id", "VALUE": "VN066"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02074
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02074
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02074-08c-1_S15_L002_R1_001.fastq.gz", "size": "3221287885", "date": "2024-09-10 03:42:47", "md5": "1ee3696895f487c8d3734e5e43f9f91a", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02074-08c-1_S15_L002_R2_001.fastq.gz", "size": "3305575516", "date": "2024-09-10 03:42:39", "md5": "178a608e547ad44f0fc0194f1cc922f8", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613799", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613799/SRR30613799", "size": "4335249336", "date": "2024-09-10 03:43:16", "md5": "57532b68231725f28e9105df58089f9b", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613799.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613799/SRR30613799.lite.1", "size": "3020730336", "date": "2024-09-10 04:41:21", "md5": "3214f83c5442e6b53ec97ca0974e952c", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]