EXPERIMENT_TITLE: Illumina NovaSeq 6000 sequencing; Raw reads: GM20847
STUDY_DESCRIPTOR_STUDY_ABSTRACT: Identifying and cataloging the occurrence of structural variants (SVs)—including deletions, insertions,duplications, and inversions—in human chromosomes, comprehensive SV discovery in human chromosomes by combiningmultiple cutting-edge genome-analyzing technologies and computational tools to generate a novel SV referenceset encompassing ethnically diverse populations, which will serve as a valuable resource to clinicians andresearchers who investigate the causes of genetic diseases.
SAMPLE_TITLE: Coriell GM20847
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "DNA-ID", "VALUE": "NA20847"}, {"TAG": "population", "VALUE": "GIH"}, {"TAG": "Super Population Code", "VALUE": "SAS"}, {"TAG": "Coriell plate", "VALUE": "HAPMAPV15"}, {"TAG": "Coriell panel", "VALUE": "MGP00018"}, {"TAG": "Population Description", "VALUE": "Gujarati Indians in Houston, Texas, USA"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "HapMap sample ID", "VALUE": "NA20847"}, {"TAG": "Super Population Description", "VALUE": "South Asian"}, {"TAG": "culture_collection", "VALUE": "CORIELL:GM20847"}]
Pool_Member_@attributes_sample_title: Coriell GM20847
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Coriell GM20847
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ERR4501161", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/ERR4501161/ERR4501161", "size": "22673471811", "date": "2020-09-18 14:58:06", "md5": "01ea1e3cc02ff7c0afa49d93c07e307b", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "ERR4501161.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos4/sra-pub-zq-1/ERR004/4501/ERR4501161/ERR4501161.lite.1", "size": "17300189955", "date": "2022-09-11 02:46:01", "md5": "bda4f817a04235b7e187954dbe34fe43", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]