EXPERIMENT_TITLE: Illumina NovaSeq 6000 sequencing; Raw reads: HG03009
STUDY_DESCRIPTOR_STUDY_ABSTRACT: Identifying and cataloging the occurrence of structural variants (SVs)—including deletions, insertions,duplications, and inversions—in human chromosomes, comprehensive SV discovery in human chromosomes by combiningmultiple cutting-edge genome-analyzing technologies and computational tools to generate a novel SV referenceset encompassing ethnically diverse populations, which will serve as a valuable resource to clinicians andresearchers who investigate the causes of genetic diseases.
SAMPLE_TITLE: Coriell HG03009
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "Coriell panel", "VALUE": "MGP00022"}, {"TAG": "Super Population Code", "VALUE": "SAS"}, {"TAG": "family_id", "VALUE": "BD2"}, {"TAG": "local_family_id", "VALUE": "TG2"}, {"TAG": "Super Population Description", "VALUE": "South Asian"}, {"TAG": "population", "VALUE": "BEB"}, {"TAG": "type", "VALUE": "unrel"}, {"TAG": "DNA-ID", "VALUE": "HG03009"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "culture_collection", "VALUE": "Coriell:HG03009"}, {"TAG": "Population Description", "VALUE": "Bengali in Bangladesh"}]
Pool_Member_@attributes_sample_title: Coriell HG03009
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Coriell HG03009
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ERR4506846", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/ERR4506846/ERR4506846", "size": "26937598820", "date": "2020-09-18 16:33:49", "md5": "f13366b610eecafd0f3e957f95b80a3d", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "ERR4506846.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos4/sra-pub-zq-1/ERR004/4506/ERR4506846/ERR4506846.lite.1", "size": "19418843008", "date": "2022-09-11 02:50:03", "md5": "2baba2d110674a6e75af56599f27875d", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]