EXPERIMENT_TITLE: GSM7610542: intact Hi-C from sciatic nerve (ENCLB054OBZ); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS936RHZ
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS936RHZ"}, {"TAG": "sample type", "VALUE": "tissue"}, {"TAG": "tissue", "VALUE": "sciatic nerve"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "health state", "VALUE": "DM: no; HTN: no; CAD: no"}, {"TAG": "dev_stage", "VALUE": "adult"}, {"TAG": "age", "VALUE": "41 year"}, {"TAG": "donor ID", "VALUE": "ENCDO575WHY"}, {"TAG": "lab", "VALUE": "Michael Snyder, Stanford"}, {"TAG": "source", "VALUE": "Yiing Lin, MD, PhD"}]
RUN_SET_RUN: [{"IDENTIFIERS": {"PRIMARY_ID": "SRR25419589", "SUBMITTER_ID": "GSM7610542_r1"}, "EXPERIMENT_REF": null, "SRAFiles": {"SRAFile": {"Alternatives": [null, null], "@attributes": {"cluster": "public", "filename": "ENCFF639PFA.fastq.gz", "url": "https://sra-pub-src-1.s3.amazonaws.com/SRR25419589/ENCFF639PFA.fastq.gz.1", "size": "195499741125", "date": "2023-08-04 01:27:17", "md5": "89f4345e442584fe06f20d9a5d1a8d8c", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}}, "CloudFiles": {"CloudFile": null}, "@attributes": {"alias": "GSM7610542_r1", "accession": "SRR25419589", "load_done": "true", "published": "2023-08-04 01:27:53", "is_public": "true", "cluster_name": "public", "static_data_available": "1"}}, {"IDENTIFIERS": {"PRIMARY_ID": "SRR25419590", "SUBMITTER_ID": "GSM7610542_r2"}, "EXPERIMENT_REF": null, "SRAFiles": {"SRAFile": {"Alternatives": [null, null], "@attributes": {"cluster": "public", "filename": "ENCFF207NUJ.fastq.gz", "url": "https://sra-pub-src-1.s3.amazonaws.com/SRR25419590/ENCFF207NUJ.fastq.gz.1", "size": "326112218368", "date": "2023-08-04 00:47:35", "md5": "0f876b107e2afa98498ea5a63142e372", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}}, "CloudFiles": {"CloudFile": null}, "@attributes": {"alias": "GSM7610542_r2", "accession": "SRR25419590", "load_done": "true", "published": "2023-08-04 01:06:23", "is_public": "true", "cluster_name": "public", "static_data_available": "1"}}]