EXPERIMENT_TITLE: GSM7657941: intact Hi-C from GM12878 (ENCLB516AHP); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS678NVO
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS678NVO"}, {"TAG": "sample type", "VALUE": "cell line"}, {"TAG": "cell line", "VALUE": "GM12878"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "health state", "VALUE": "unknown"}, {"TAG": "dev_stage", "VALUE": "adult"}, {"TAG": "donor ID", "VALUE": "ENCDO000AAK"}, {"TAG": "lab", "VALUE": "Mats Ljungman, UMichigan"}, {"TAG": "source", "VALUE": "Coriell"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS678NVO
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS678NVO
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419958.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos1/sra-pub-zq-38/SRR025/25419/SRR25419958/SRR25419958.lite.1", "size": "30069910050", "date": "2023-08-18 21:24:32", "md5": "1a970b27bf74f6ae60b229a70b25ce6d", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419958", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419958/SRR25419958", "size": "60368409873", "date": "2023-08-13 19:35:46", "md5": "a27dae57d8a39d614cde827ad1b24ac5", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF578JEE.fastq.gz", "size": "62135099489", "date": "2023-08-13 19:20:13", "md5": "f1d678a0dc4c0fe1739121047e60207b", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]