EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02300
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02300
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02300"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Peruvian in Lima, Peru"}, {"TAG": "family id", "VALUE": "PEL52"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02300
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02300
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02300-42a-1_S21_L003_R1_001.fastq.gz", "size": "6544156679", "date": "2024-09-10 03:47:20", "md5": "c486b21ffa4c0f98a9e68f033a909963", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02300-42a-1_S21_L003_R2_001.fastq.gz", "size": "6851882265", "date": "2024-09-10 03:47:33", "md5": "0c3edce7bcf5a5f3b68b637d716124b0", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613638", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613638/SRR30613638", "size": "8971780223", "date": "2024-09-10 03:48:07", "md5": "b98f35d6393df81ae2a9efe6f2ecec4d", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613638.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613638/SRR30613638.lite.1", "size": "6351722083", "date": "2024-09-10 04:40:57", "md5": "adf35c9fd659bc25865ee8a02d29bb2b", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]