EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG00544
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG00544
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG00544"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Han Chinese South"}, {"TAG": "family id", "VALUE": "SH042"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG00544
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG00544
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG00544-24ab-1_S1_L003_R1_001.fastq.gz", "size": "13069458300", "date": "2024-09-10 04:26:58", "md5": "8f80dc2fc1be7716fb587d715f588d57", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG00544-24ab-1_S1_L003_R2_001.fastq.gz", "size": "13781146569", "date": "2024-09-10 04:30:00", "md5": "6bf33df8e8149f54f17bcd3502936691", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613927", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613927/SRR30613927", "size": "17888281819", "date": "2024-09-10 04:38:53", "md5": "b80c676f5561a660d009894c4a41c7e2", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613927.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613927/SRR30613927.lite.1", "size": "13158910115", "date": "2024-09-10 06:25:49", "md5": "9bf490be51f649314486e1603525a520", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]