EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG04184
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG04184
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG04184"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Bengali in Bangladesh"}, {"TAG": "family id", "VALUE": "BD61"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG04184
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG04184
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG04184-39a-2_S12_L003_R1_001.fastq.gz", "size": "7805304461", "date": "2024-09-10 03:52:27", "md5": "2c797ab5dd1454ffcf2cc9e748e8651e", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG04184-39a-2_S12_L003_R2_001.fastq.gz", "size": "8103371136", "date": "2024-09-10 03:52:47", "md5": "5bbd0bc6d0b6b7dd1e8e2b8762fe9511", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613853", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613853/SRR30613853", "size": "10605976639", "date": "2024-09-10 03:55:47", "md5": "1310b0357dc12482cac4ef2243bf2114", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613853.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613853/SRR30613853.lite.1", "size": "7613370019", "date": "2024-09-10 04:43:55", "md5": "28b54bc0f353d1c7114f0a46ecdecd0d", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]