EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG01884
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG01884
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG01884"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "African Caribbean in Barbados"}, {"TAG": "family id", "VALUE": "BB03"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG01884
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG01884
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG01884-49d-2_S6_L002_R1_001.fastq.gz", "size": "19484259974", "date": "2024-09-10 04:29:41", "md5": "1fedb0e7af456a2ea4d206a17ccf86c1", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG01884-49d-2_S6_L002_R2_001.fastq.gz", "size": "22660519079", "date": "2024-09-10 04:30:42", "md5": "69d03893cc4289a00afd4c34f341a7a4", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613808", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613808/SRR30613808", "size": "28476964527", "date": "2024-09-10 04:36:08", "md5": "3dc35e093d886b165e9b144aa6af6ff5", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613808.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613808/SRR30613808.lite.1", "size": "19328440179", "date": "2024-09-10 06:27:31", "md5": "be8717f41b023a6d9e67e0e044d4e5c2", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]