EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG03669
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG03669
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG03669"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Punjabi in Lahore, Pakistan"}, {"TAG": "family id", "VALUE": "PK58"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG03669
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG03669
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG03669-26a-2_S4_L004_R1_001.fastq.gz", "size": "6936906207", "date": "2024-09-10 04:04:01", "md5": "8737700e542f4da7ff15be0d582eb980", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG03669-26a-2_S4_L004_R2_001.fastq.gz", "size": "6947529382", "date": "2024-09-10 04:06:20", "md5": "e06a7911329083f00c56fa6aadd6030c", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613616", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613616/SRR30613616", "size": "9262474039", "date": "2024-09-10 04:12:29", "md5": "d28136c137fce9cdc18366d906616bda", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613616.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613616/SRR30613616.lite.1", "size": "6927106527", "date": "2024-09-10 04:41:19", "md5": "ed5740a27268f7910751da9cea70be2f", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]