EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02135
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02135
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02135"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Kinh in Ho Chi Minh City, Vietnam"}, {"TAG": "family id", "VALUE": "VN081"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02135
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02135
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02135-09a-2_S8_L004_R1_001.fastq.gz", "size": "11709912380", "date": "2024-09-10 04:15:08", "md5": "059823a2771a4aeb57be1b67a280a3a9", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02135-09a-2_S8_L004_R2_001.fastq.gz", "size": "11427152420", "date": "2024-09-10 04:12:43", "md5": "c86f27dd0e3b75d33e4dae1b73abd52d", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613713", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613713/SRR30613713", "size": "15634374441", "date": "2024-09-10 04:25:17", "md5": "c3a266a1554b65a0605ff6d8a9c3f0ec", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613713.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613713/SRR30613713.lite.1", "size": "11071131053", "date": "2024-09-10 04:41:30", "md5": "86c9de699fad1c08f4a6476750ce51a4", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]