EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG01496
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG01496
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG01496"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Colombian in Medellin, Colombia"}, {"TAG": "family id", "VALUE": "CLM64"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG01496
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG01496
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG01496-43a-2_S14_L001_R1_001.fastq.gz", "size": "7526163323", "date": "2024-09-10 03:57:00", "md5": "736cdbd46f2010ac63f8ef8c790cda88", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG01496-43a-2_S14_L001_R2_001.fastq.gz", "size": "7934205159", "date": "2024-09-10 03:57:27", "md5": "f0f7aeaf0d3c7c4d137aace6045b00c6", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613816", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613816/SRR30613816", "size": "10255311983", "date": "2024-09-10 03:59:32", "md5": "76f5dff9d11e18c615834ea706364f3b", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613816.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613816/SRR30613816.lite.1", "size": "7449623939", "date": "2024-09-10 04:42:31", "md5": "fdf6848fb7f267330258c0d1c67364fd", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]