EXPERIMENT_TITLE: GSM7618735: intact Hi-C from HCT116 (ENCLB009JSZ); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS690BSF
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS690BSF"}, {"TAG": "sample type", "VALUE": "cell line"}, {"TAG": "cell line", "VALUE": "HCT116"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "health state", "VALUE": "colorectal carcinoma"}, {"TAG": "dev_stage", "VALUE": "adult"}, {"TAG": "age", "VALUE": "48 year"}, {"TAG": "donor ID", "VALUE": "ENCDO000ABE"}, {"TAG": "lab", "VALUE": "Erez Aiden, Baylor"}, {"TAG": "source", "VALUE": "Dr. Masato Kanemaki"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS690BSF
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS690BSF
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419654.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos5/sra-pub-zq-16/SRR025/25419/SRR25419654/SRR25419654.lite.1", "size": "56950796701", "date": "2023-08-11 00:09:36", "md5": "dbdab2d3515a727b446996f9c3ff5d90", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419654", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419654/SRR25419654", "size": "99792382185", "date": "2023-08-05 22:05:40", "md5": "69c8e1d9cb2e8bac72fa014fd2aa7f4d", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF914AZF.fastq.gz", "size": "124161575344", "date": "2023-08-05 21:47:50", "md5": "92c96f06027bc0434efb21b32a4a9155", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]