EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG03831
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG03831
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG03831"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Bengali in Bangladesh"}, {"TAG": "family id", "VALUE": "BD27"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG03831
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG03831
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG03831-37a-2_S16_L003_R1_001.fastq.gz", "size": "10344484901", "date": "2024-09-10 03:56:34", "md5": "47e51835b7badf00e3f641bfe8df3d66", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG03831-37a-2_S16_L003_R2_001.fastq.gz", "size": "9674433995", "date": "2024-09-10 03:57:08", "md5": "5ee5f8de46fb2b0eedc4f560b06c28bd", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613859", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613859/SRR30613859", "size": "13592995854", "date": "2024-09-10 04:00:01", "md5": "c72f5d3f80b32726b0bb4b3c1d436b80", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613859.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613859/SRR30613859.lite.1", "size": "9045455714", "date": "2024-09-10 04:44:04", "md5": "a11c7367ca9e8cea97f53a7745dd4ba2", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]