EXPERIMENT_TITLE: GSM7622008: intact Hi-C from breast epithelium (ENCLB561FEI); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS712PKE
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS712PKE"}, {"TAG": "sample type", "VALUE": "tissue"}, {"TAG": "tissue", "VALUE": "breast epithelium"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "dev_stage", "VALUE": "adult"}, {"TAG": "age", "VALUE": "53 year"}, {"TAG": "donor ID", "VALUE": "ENCDO793LXB"}, {"TAG": "lab", "VALUE": "Erez Aiden, Baylor"}, {"TAG": "source", "VALUE": "Kristin Ardlie"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS712PKE
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS712PKE
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null], "@attributes": {"cluster": "public", "filename": "ENCFF627UCI.fastq.gz", "url": "https://sra-pub-src-1.s3.amazonaws.com/SRR25419675/ENCFF627UCI.fastq.gz.1", "size": "90919560003", "date": "2023-08-07 19:48:14", "md5": "3f316bc9d24fcfe531cc455d30015ac9", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419675", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419675/SRR25419675", "size": "115303924762", "date": "2023-08-07 20:28:21", "md5": "6c8f80b6386beb0ad34748d4dae01471", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419675.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos4/sra-pub-zq-5/SRR025/25419/SRR25419675/SRR25419675.lite.1", "size": "50459543784", "date": "2023-08-12 21:53:37", "md5": "89f0d15df394e2b6324dad4062ca4825", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]