EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG00867
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG00867"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "collection_date", "VALUE": "2022-10-11"}, {"TAG": "geo_loc_name", "VALUE": "China"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG00867-1_FC2_S7_L001_R1_001.fastq.gz", "size": "11269535248", "date": "2024-08-21 23:37:22", "md5": "b86cc570c2de50005d62586678743d8b", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG00867-1_FC2_S7_L001_R2_001.fastq.gz", "size": "11634954979", "date": "2024-08-21 23:37:02", "md5": "369a634bb17a9e490f1e1afd3780ff79", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30310937", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30310937/SRR30310937", "size": "15404184362", "date": "2024-08-21 23:38:43", "md5": "79999f4ad6b4e815b346a439be9774d6", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30310937.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30310/SRR30310937/SRR30310937.lite.1", "size": "9897583254", "date": "2024-08-22 03:04:53", "md5": "c417c28df189bb493dc4b52ad0b9843f", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]