EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG00609
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG00609
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG00609"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Han Chinese South"}, {"TAG": "family id", "VALUE": "SH062"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG00609
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG00609
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG00609-38a-2_S10_L003_R1_001.fastq.gz", "size": "5210898590", "date": "2024-09-10 03:50:18", "md5": "ab41a2e3c341793804b1a755dd469fef", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG00609-38a-2_S10_L003_R2_001.fastq.gz", "size": "5442540913", "date": "2024-09-10 03:50:30", "md5": "4680e1d95c6fbce9e9e693eb7ba8f36e", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613769", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613769/SRR30613769", "size": "7062385236", "date": "2024-09-10 03:51:08", "md5": "3bcd6051fc2e4140ba57c2a9d02a07cc", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613769.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613769/SRR30613769.lite.1", "size": "5003896364", "date": "2024-09-10 04:40:50", "md5": "15f9a373a7e97264499a8401358876e5", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]