EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02698
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02698
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02698"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Punjabi in Lahore, Pakistan"}, {"TAG": "family id", "VALUE": "PK21"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02698
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02698
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02698-18b-1_S19_L004_R1_001.fastq.gz", "size": "5365358636", "date": "2024-09-10 03:46:22", "md5": "c419f80087396c1630b0de53e75a6bbd", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02698-18b-1_S19_L004_R2_001.fastq.gz", "size": "5427851825", "date": "2024-09-10 03:46:33", "md5": "892ccffe0157f27831047cd1419d2bf3", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613899", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613899/SRR30613899", "size": "7240470511", "date": "2024-09-10 03:48:33", "md5": "9ad6705ff1b40254f39713959f6a1ec8", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613899.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613899/SRR30613899.lite.1", "size": "5006909275", "date": "2024-09-10 04:45:58", "md5": "6b7fd949752ceb017b637f0ad13b13df", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]