EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG01981
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG01981
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG01981"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Peruvian in Lima, Peru"}, {"TAG": "family id", "VALUE": "PEL27"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG01981
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG01981
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613725.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613725/SRR30613725.lite.1", "size": "20143869906", "date": "2024-09-10 06:30:51", "md5": "47cea41cc8e9b216b1add843b27b7032", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613725", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613725/SRR30613725", "size": "30151758170", "date": "2024-09-10 04:42:07", "md5": "0fe4886d1081f07fc9f908492d5eebf0", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG01981-51d-1_S1_L004_R2_001.fastq.gz", "size": "23737345317", "date": "2024-09-10 04:36:06", "md5": "eacf3e9dbed36ab9f554e3cafd7cd477", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG01981-51d-1_S1_L004_R1_001.fastq.gz", "size": "20638045224", "date": "2024-09-10 04:36:59", "md5": "ad592359f0303b94d8e4ebde2a97c8ab", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]