EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG01099
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG01099
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG01099"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Puerto Rican in Puerto Rico"}, {"TAG": "family id", "VALUE": "PR31"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG01099
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG01099
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG01099-48d-1_S9_L001_R1_001.fastq.gz", "size": "23074732916", "date": "2024-09-10 04:19:23", "md5": "9cf6011b3c33f26482475e2be28a61b6", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG01099-48d-1_S9_L001_R2_001.fastq.gz", "size": "26003669149", "date": "2024-09-10 04:18:29", "md5": "c9aa69beaba7fcae98b04506750dfcb4", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613670", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613670/SRR30613670", "size": "33031702896", "date": "2024-09-10 04:25:21", "md5": "385f1491937e77b6378d319d1e3f654f", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613670.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613670/SRR30613670.lite.1", "size": "22902915312", "date": "2024-09-10 05:27:39", "md5": "e05c66993e55e0528fbac2843d0bf697", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]