EXPERIMENT_TITLE: GSM7646170: intact Hi-C from HCT116 (ENCLB697CQX); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS253RUX
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS253RUX"}, {"TAG": "sample type", "VALUE": "cell line"}, {"TAG": "cell line", "VALUE": "HCT116"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "health state", "VALUE": "colorectal carcinoma"}, {"TAG": "dev_stage", "VALUE": "adult"}, {"TAG": "age", "VALUE": "48 year"}, {"TAG": "donor ID", "VALUE": "ENCDO000ABE"}, {"TAG": "lab", "VALUE": "Erez Aiden, Baylor"}, {"TAG": "source", "VALUE": "Dr. Masato Kanemaki"}, {"TAG": "treatments", "VALUE": "treatment_term_name: 5-Phenyl-1H-indole-3-acetic acid; treatment_type: chemical; duration: 6; duration_units: hour;"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS253RUX
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS253RUX
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419759.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos2/sra-pub-zq-18/SRR025/25419/SRR25419759/SRR25419759.lite.1", "size": "63489653054", "date": "2023-08-16 04:32:19", "md5": "3af3aae05932f0697e78ca3eb4219af4", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419759", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419759/SRR25419759", "size": "142863944278", "date": "2023-08-11 00:49:38", "md5": "c9b7f84287438eb421b706f8c5d015dd", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF008RYY.fastq.gz", "size": "179087831567", "date": "2023-08-10 23:31:26", "md5": "677da7eb851d15b4d3403b98047027a3", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]