EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02615
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02615
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02615"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Gambian in Western Division, The Gambia - Mandinka"}, {"TAG": "family id", "VALUE": "GB29"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02615
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02615
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02615-25b-1_S3_L003_R1_001.fastq.gz", "size": "11881195354", "date": "2024-09-10 04:08:45", "md5": "9ebcfdf79872c366cc63fa700cfc3338", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02615-25b-1_S3_L003_R2_001.fastq.gz", "size": "10629061097", "date": "2024-09-10 04:09:13", "md5": "7f48239e4bc4bc6eaf6b259aa9e93bf2", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613626", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613626/SRR30613626", "size": "15418739307", "date": "2024-09-10 04:11:19", "md5": "0dab6cd5107c689a885509d8fb1567cb", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613626.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613626/SRR30613626.lite.1", "size": "10475062511", "date": "2024-09-10 04:41:40", "md5": "ebdd6474fc8289612ad49cf11362b765", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]