EXPERIMENT_TITLE: GSM7622067: intact Hi-C from dendritic cell (ENCLB831ETN); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS401CSG
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS401CSG"}, {"TAG": "sample type", "VALUE": "primary cell"}, {"TAG": "cell type", "VALUE": "dendritic cell"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "dev_stage", "VALUE": "adult"}, {"TAG": "age", "VALUE": "51 year"}, {"TAG": "donor ID", "VALUE": "ENCDO346BRO"}, {"TAG": "lab", "VALUE": "Charles Lee"}, {"TAG": "source", "VALUE": "AllCells"}, {"TAG": "treatments", "VALUE": "treatment_term_id: UniProtKB:P04141; treatment_term_name: granulocyte-macrophage colony-stimulating factor; treatment_type: protein; duration: 4; duration_units: day; treatment_term_id: UniProtKB:P05112; treatment_term_name: Interleukin-4; treatment_type: protein; duration: 4; duration_units: day;"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS401CSG
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS401CSG
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419738.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos4/sra-pub-zq-3/SRR025/25419/SRR25419738/SRR25419738.lite.1", "size": "88976053828", "date": "2023-08-31 04:24:22", "md5": "49097d30a54f71f85a4252f4581d2d37", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419738", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419738/SRR25419738", "size": "188168873649", "date": "2023-08-26 01:11:16", "md5": "30940f3316768c7d3a2d4df124dfd81c", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF867YNV.fastq.gz", "size": "160043702932", "date": "2023-08-26 00:20:46", "md5": "5c1f567b00b8436d7b0f7c2db84ea591", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]