EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG01943
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG01943
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG01943"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Peruvian in Lima, Peru"}, {"TAG": "family id", "VALUE": "PEL016"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG01943
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG01943
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG01943-51f-1_S15_L002_R1_001.fastq.gz", "size": "13074233761", "date": "2024-09-10 04:12:10", "md5": "d45d3475f201ee45b90842301957ee9f", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG01943-51f-1_S15_L002_R2_001.fastq.gz", "size": "14110172929", "date": "2024-09-10 04:12:52", "md5": "ab352506b6488f286dfccc64903e08f2", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613732", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613732/SRR30613732", "size": "18130554038", "date": "2024-09-10 04:16:48", "md5": "3e3a363d338cb27acbf6c4863d33b002", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613732.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613732/SRR30613732.lite.1", "size": "13123298218", "date": "2024-09-10 04:42:25", "md5": "192df9ff4d639d25f3bf004392464ac6", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]