EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG01099
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG01099
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG01099"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Puerto Rican in Puerto Rico"}, {"TAG": "family id", "VALUE": "PR31"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG01099
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG01099
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG01099-48d-2_S10_L003_R1_001.fastq.gz", "size": "16937251045", "date": "2024-09-10 04:22:02", "md5": "a8e5e93c39c8fb67512d05f4b03d18a0", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG01099-48d-2_S10_L003_R2_001.fastq.gz", "size": "19826499940", "date": "2024-09-10 04:22:53", "md5": "66698b77a7c20a2381af712364be93c8", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613662", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613662/SRR30613662", "size": "25009355147", "date": "2024-09-10 04:25:48", "md5": "099d58cac4fe21d4b94f49cc6c80c0e2", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613662.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613662/SRR30613662.lite.1", "size": "16387431275", "date": "2024-09-10 04:41:53", "md5": "b61c37d48355b7e020c915a0d71b4016", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]