EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02922
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02922"}, {"TAG": "age", "VALUE": "No data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Esan in Nigeria"}, {"TAG": "family id", "VALUE": "NG06"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02922-1_S18_L002_R1_001.fastq.gz", "size": "8856543164", "date": "2024-08-14 21:15:06", "md5": "29f651e28869420120a9bb84c9b529a1", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02922-1_S18_L002_R2_001.fastq.gz", "size": "9075615094", "date": "2024-08-14 21:15:29", "md5": "ce810d398591ec86feff63a03ab63a87", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30242184", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30242184/SRR30242184", "size": "12124257590", "date": "2024-08-14 21:16:41", "md5": "19e5e22b6a685b20e138cb7d1559a132", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30242184.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30242/SRR30242184/SRR30242184.lite.1", "size": "8231054174", "date": "2024-08-14 22:42:52", "md5": "35b26b538e1c1ade567660872607899d", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]