EXPERIMENT_TITLE: GSM7657942: intact Hi-C from GM12878 (ENCLB264WKT); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS678NVO
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS678NVO"}, {"TAG": "sample type", "VALUE": "cell line"}, {"TAG": "cell line", "VALUE": "GM12878"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "health state", "VALUE": "unknown"}, {"TAG": "dev_stage", "VALUE": "adult"}, {"TAG": "donor ID", "VALUE": "ENCDO000AAK"}, {"TAG": "lab", "VALUE": "Mats Ljungman, UMichigan"}, {"TAG": "source", "VALUE": "Coriell"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS678NVO
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS678NVO
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF865QIE.fastq.gz", "size": "106683948640", "date": "2023-08-14 04:42:18", "md5": "ef9eb0b77a83aa29ff79085db76edf40", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419959", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419959/SRR25419959", "size": "102741403122", "date": "2023-08-14 05:10:26", "md5": "de077453bc9f9198d2f003b02e179805", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419959.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos4/sra-pub-zq-5/SRR025/25419/SRR25419959/SRR25419959.lite.1", "size": "51620833636", "date": "2023-08-19 08:25:14", "md5": "9c650f97753d5b73b8a53f3c004aa1a6", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]