EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG00738
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG00738
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG00738"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Puerto Rican in Puerto Rico"}, {"TAG": "family id", "VALUE": "PR07"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG00738
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG00738
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG00738-27a-2_S6_L004_R1_001.fastq.gz", "size": "10753400748", "date": "2024-09-10 04:22:29", "md5": "a459f1fb0bc3bbb013e78e5ce8d88099", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG00738-27a-2_S6_L004_R2_001.fastq.gz", "size": "11188756361", "date": "2024-09-10 04:27:08", "md5": "cf4fabfb6c5a48008b132b2d0411ae5b", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613824", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613824/SRR30613824", "size": "14685804287", "date": "2024-09-10 04:46:06", "md5": "2e55f28a57cddb243796af72dda491d6", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613824.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613824/SRR30613824.lite.1", "size": "10616079951", "date": "2024-09-10 06:24:04", "md5": "b0efbff0948b4e196db638597b5ded95", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]