EXPERIMENT_TITLE: HiC of homo sapiens: U251 DMSO
STUDY_DESCRIPTOR_STUDY_ABSTRACT: HiC, ChIP-seq, RNA-seq data of U251 glioma cells under DMSO and TMZ treatment respectively.
SAMPLE_TITLE: HiC_DMSO-5
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HiC"}, {"TAG": "age", "VALUE": "unkown"}, {"TAG": "biomaterial_provider", "VALUE": "Bohan Chen"}, {"TAG": "collection_date", "VALUE": "2023"}, {"TAG": "geo_loc_name", "VALUE": "China"}, {"TAG": "sex", "VALUE": "not collected"}, {"TAG": "tissue", "VALUE": "GBM"}, {"TAG": "cell_line", "VALUE": "U251"}, {"TAG": "treatment", "VALUE": "HiC_DMSO-5"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: HiC_DMSO-5
RUN_SET_RUN_Pool_Member_@attributes_sample_title: HiC_DMSO-5
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR27043133.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR027/27043/SRR27043133/SRR27043133.lite.1", "size": "4271472183", "date": "2023-12-04 16:43:21", "md5": "9e04262aa31847aafa78f3c14163bd85", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR27043133", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR27043133/SRR27043133", "size": "6797681127", "date": "2023-12-04 14:30:57", "md5": "f67e9bc8db0d6e303012a331b1bb70f1", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "FCHHNLWCCXY_L5_CWHPE18020033_2.fastq.gz", "size": "4880985730", "date": "2023-12-04 14:25:08", "md5": "9ec4f445200a691b962fc0f75b65e32e", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "FCHHNLWCCXY_L5_CWHPE18020033_1.fastq.gz", "size": "4285434496", "date": "2023-12-04 14:24:11", "md5": "b313430f151ca678a644e9b8b6f17a5d", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]