EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02293
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02293
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02293"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Peruvian in Lima, Peru"}, {"TAG": "family id", "VALUE": "PEL51"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02293
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02293
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02293-54d-2_S8_L001_R1_001.fastq.gz", "size": "16022168219", "date": "2024-09-10 04:23:05", "md5": "2eff3eb224a5c3e029f8f0045c8843eb", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02293-54d-2_S8_L001_R2_001.fastq.gz", "size": "19336727869", "date": "2024-09-10 04:23:53", "md5": "c72c470cd21a2f36ec672814cf8eade5", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613704", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613704/SRR30613704", "size": "24028648816", "date": "2024-09-10 04:30:42", "md5": "efc3252e85d286fa21adbd54765ce49a", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613704.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613704/SRR30613704.lite.1", "size": "15735483388", "date": "2024-09-10 04:45:12", "md5": "a17952e97fc859883a75f597c25a68a1", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]