EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02698
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02698
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02698"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Punjabi in Lahore, Pakistan"}, {"TAG": "family id", "VALUE": "PK21"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02698
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02698
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02698-18b-1_S19_L003_R1_001.fastq.gz", "size": "5451692354", "date": "2024-09-10 03:47:44", "md5": "b2456885130abfa9d0c5c6fdefeaf199", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02698-18b-1_S19_L003_R2_001.fastq.gz", "size": "5511559932", "date": "2024-09-10 03:47:33", "md5": "b7f0877532494e6edd5f89ef9adf7a26", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613900", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613900/SRR30613900", "size": "7354314190", "date": "2024-09-10 03:48:41", "md5": "8e64e221815e92b6a53d310520f6f67d", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613900.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613900/SRR30613900.lite.1", "size": "5065020046", "date": "2024-09-10 04:44:25", "md5": "5d3c8a8006567776e99d780c9894cd8b", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]