EXPERIMENT_TITLE: GSM7657984: intact Hi-C from PC-9 (ENCLB750IEX); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS829YOF
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS829YOF"}, {"TAG": "sample type", "VALUE": "cell line"}, {"TAG": "cell line", "VALUE": "PC-9"}, {"TAG": "sex", "VALUE": "unknown"}, {"TAG": "dev_stage", "VALUE": "unknown"}, {"TAG": "donor ID", "VALUE": "ENCDO647UHQ"}, {"TAG": "lab", "VALUE": "Mats Ljungman, UMichigan"}, {"TAG": "source", "VALUE": "Sigma"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS829YOF
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS829YOF
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25420044.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos1/sra-pub-zq-38/SRR025/25420/SRR25420044/SRR25420044.lite.1", "size": "39329696025", "date": "2023-08-18 03:36:11", "md5": "6fb93244ef1778e7f90f2006eed70107", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25420044", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25420044/SRR25420044", "size": "73487987097", "date": "2023-08-12 23:33:44", "md5": "a11a68bb9e7fc2ff846d0a50af0b082e", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF953JCX.fastq.gz", "size": "95816378199", "date": "2023-08-12 23:14:17", "md5": "b27f4f7e30b1141de0ace717ad564ef8", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]