EXPERIMENT_TITLE: GSM7657231: intact Hi-C from right cardiac atrium (ENCLB179ALF); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS852VTT
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS852VTT"}, {"TAG": "sample type", "VALUE": "tissue"}, {"TAG": "tissue", "VALUE": "right cardiac atrium"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "health state", "VALUE": "DM: no; HTN: yes; CAD: no; lungs with severe emphysema"}, {"TAG": "dev_stage", "VALUE": "adult"}, {"TAG": "age", "VALUE": "60 year"}, {"TAG": "donor ID", "VALUE": "ENCDO520EJG"}, {"TAG": "lab", "VALUE": "Michael Snyder, Stanford"}, {"TAG": "source", "VALUE": "Yiing Lin, MD, PhD"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS852VTT
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS852VTT
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF756HRM.fastq.gz", "size": "168154215151", "date": "2023-08-09 20:49:19", "md5": "d5001312bed9a9ddc918a6f65d9c1191", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419943", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419943/SRR25419943", "size": "152746476520", "date": "2023-08-09 21:32:39", "md5": "aec13d6eb0c461ca0feff74649b8122e", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419943.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos2/sra-pub-zq-20/SRR025/25419/SRR25419943/SRR25419943.lite.1", "size": "69178174548", "date": "2023-08-14 23:54:29", "md5": "f35e21b6a65f4a9ef952147df7ab0904", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]