EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG00544
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG00544
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG00544"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Han Chinese South"}, {"TAG": "family id", "VALUE": "SH042"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG00544
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG00544
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG00544-24ab-1_S1_L001_R1_001.fastq.gz", "size": "13039440101", "date": "2024-09-10 04:24:06", "md5": "443d4bf5b407909f5c320ef9756d7d05", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG00544-24ab-1_S1_L001_R2_001.fastq.gz", "size": "13876287887", "date": "2024-09-10 04:31:13", "md5": "1dca0c5c1eece1c829220c49e0b765a1", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613813", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613813/SRR30613813", "size": "17942845217", "date": "2024-09-10 04:54:31", "md5": "00895fe0bf7c7a498794df83222b6870", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613813.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613813/SRR30613813.lite.1", "size": "13179523253", "date": "2024-09-10 06:24:41", "md5": "14cb8455c1b24516c5223b6e9224f701", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]