EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02293
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02293
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02293"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Peruvian in Lima, Peru"}, {"TAG": "family id", "VALUE": "PEL51"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02293
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02293
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02293-54d-1_S7_L001_R1_001.fastq.gz", "size": "18560546451", "date": "2024-09-10 04:12:00", "md5": "0ff67dea932db96fa2fe2c12feb440d2", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02293-54d-1_S7_L001_R2_001.fastq.gz", "size": "21337915381", "date": "2024-09-10 04:13:04", "md5": "84d9963a234ef2c895f02ca08ae99066", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613700", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613700/SRR30613700", "size": "26891405155", "date": "2024-09-10 04:16:47", "md5": "abacb78e31562a787cfbb776d6576b32", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613700.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613700/SRR30613700.lite.1", "size": "18378427343", "date": "2024-09-10 04:42:03", "md5": "e9bc9752ad3ea02f8b62727bc828811c", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]