EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG03669
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG03669
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG03669"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Punjabi in Lahore, Pakistan"}, {"TAG": "family id", "VALUE": "PK58"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG03669
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG03669
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG03669-26a-1_S3_L003_R1_001.fastq.gz", "size": "9362760663", "date": "2024-09-10 03:55:03", "md5": "9cd11128fb64172fb6b92457f3a0e31e", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG03669-26a-1_S3_L003_R2_001.fastq.gz", "size": "9573507928", "date": "2024-09-10 03:55:29", "md5": "2d8ee449e6398a463a32987d6da8de1f", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613778", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613778/SRR30613778", "size": "12757732294", "date": "2024-09-10 03:58:50", "md5": "6f524e01d7248edae7cd39ae8a8bc929", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613778.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613778/SRR30613778.lite.1", "size": "9141325930", "date": "2024-09-10 04:42:47", "md5": "3e21b2c7aafe27bd98a69548587ff77c", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]