EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02615
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02615
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02615"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Gambian in Western Division, The Gambia - Mandinka"}, {"TAG": "family id", "VALUE": "GB29"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02615
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02615
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02615-25b-2_S4_L004_R1_001.fastq.gz", "size": "9081156182", "date": "2024-09-10 03:55:04", "md5": "01c01ea1c42101c5b1dbf557d8acd4f1", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02615-25b-2_S4_L004_R2_001.fastq.gz", "size": "8118092157", "date": "2024-09-10 03:54:46", "md5": "1191497214cfa5b581a7dd9e68b6b201", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613897", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613897/SRR30613897", "size": "11790568177", "date": "2024-09-10 04:00:09", "md5": "05b10dd79a2defb0787ba1b087d17acc", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613897.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613897/SRR30613897.lite.1", "size": "7928779309", "date": "2024-09-10 04:45:17", "md5": "64e7b14bfa600efb14187807ac64f8e8", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]