EXPERIMENT_TITLE: GSM7656197: intact Hi-C from spleen (ENCLB042XAY); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS920YAO
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS920YAO"}, {"TAG": "sample type", "VALUE": "tissue"}, {"TAG": "tissue", "VALUE": "spleen"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "health state", "VALUE": "DM: no; HTN: no; CAD: no; lungs with moderate emphysema"}, {"TAG": "dev_stage", "VALUE": "adult"}, {"TAG": "age", "VALUE": "61 year"}, {"TAG": "donor ID", "VALUE": "ENCDO186XRB"}, {"TAG": "lab", "VALUE": "Michael Snyder, Stanford"}, {"TAG": "source", "VALUE": "Yiing Lin, MD, PhD"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS920YAO
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS920YAO
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF669RLY.fastq.gz", "size": "107320088136", "date": "2023-08-11 07:22:15", "md5": "76ffa515fbcf83c19168de8122afd5e9", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419896", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419896/SRR25419896", "size": "132107793162", "date": "2023-08-11 08:14:45", "md5": "463ee3c06456151b95b3435270740981", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419896.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos2/sra-pub-zq-18/SRR025/25419/SRR25419896/SRR25419896.lite.1", "size": "63536623121", "date": "2023-08-16 09:44:50", "md5": "ae3a33f9dd3bea7c746da850c6c3e644", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]