EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG00323
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG00323"}, {"TAG": "age", "VALUE": "No data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Finnish in Finland"}, {"TAG": "family id", "VALUE": "HG00323"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG00323-1_S23_L002_R1_001.fastq.gz", "size": "5332769399", "date": "2024-08-14 21:02:49", "md5": "35ae079852040ae88ed38df676090e32", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG00323-1_S23_L002_R2_001.fastq.gz", "size": "5644249231", "date": "2024-08-14 21:02:20", "md5": "4d37851ab920759b6e5535ef41ac5441", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30242506", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30242506/SRR30242506", "size": "7389661451", "date": "2024-08-14 21:05:18", "md5": "251139561b6724f315097b246a5f5810", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30242506.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30242/SRR30242506/SRR30242506.lite.1", "size": "4967882279", "date": "2024-08-14 22:51:04", "md5": "434c772ae7867c4e6afa5c4c139a55b4", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]