EXPERIMENT_TITLE: GSM7656192: intact Hi-C from K562 (ENCLB796WKU); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS104XTA
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS104XTA"}, {"TAG": "sample type", "VALUE": "cell line"}, {"TAG": "cell line", "VALUE": "K562"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "health state", "VALUE": "chronic myelogenous leukemia (CML)"}, {"TAG": "dev_stage", "VALUE": "adult"}, {"TAG": "age", "VALUE": "53 year"}, {"TAG": "donor ID", "VALUE": "ENCDO000AAD"}, {"TAG": "lab", "VALUE": "Mats Ljungman, UMichigan"}, {"TAG": "source", "VALUE": "ATCC"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS104XTA
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS104XTA
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419888.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos5/sra-pub-zq-11/SRR025/25419/SRR25419888/SRR25419888.lite.1", "size": "45443581634", "date": "2023-08-13 23:21:35", "md5": "5edacac8f31014129aa9e0e18fcb5822", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419888", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419888/SRR25419888", "size": "85653936176", "date": "2023-08-08 21:55:03", "md5": "6a82432daa0461d870cdd5ebce2d9be0", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF385TJC.fastq.gz", "size": "110849808131", "date": "2023-08-08 21:32:38", "md5": "40f721b112d3b0ca599e5f45d177e969", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]