EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG03927
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG03927
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG03927"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Bengali in Bangladesh"}, {"TAG": "family id", "VALUE": "BD37"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG03927
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG03927
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG03927-31b-2_S6_L001_R1_001.fastq.gz", "size": "11611573263", "date": "2024-09-10 03:59:05", "md5": "59f5685ec03dda7195baff4ae5719329", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG03927-31b-2_S6_L001_R2_001.fastq.gz", "size": "10372723181", "date": "2024-09-10 03:58:39", "md5": "f13f03facfd12472faa9ad2dce3cf759", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613697", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613697/SRR30613697", "size": "15134348482", "date": "2024-09-10 04:03:01", "md5": "827b5eddad383326c2654400cedeceb1", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613697.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613697/SRR30613697.lite.1", "size": "10325262262", "date": "2024-09-10 04:40:38", "md5": "5d47cfbaf23b7eddc654edc1053e226e", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]