EXPERIMENT_TITLE: GSM7657998: intact Hi-C from heart left ventricle (ENCLB555TEV); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS129GXC
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS129GXC"}, {"TAG": "sample type", "VALUE": "tissue"}, {"TAG": "tissue", "VALUE": "heart left ventricle"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "health state", "VALUE": "nonischemic (EF 23%, LVEDD 6.1; RV moderate dilation, normal function)"}, {"TAG": "dev_stage", "VALUE": "adult"}, {"TAG": "age", "VALUE": "43 year"}, {"TAG": "donor ID", "VALUE": "ENCDO967KID"}, {"TAG": "lab", "VALUE": "Michael Snyder, Stanford"}, {"TAG": "source", "VALUE": "Shin Lin"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS129GXC
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS129GXC
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF749DGJ.fastq.gz", "size": "188873267670", "date": "2023-08-15 13:56:50", "md5": "1262e30af81fcfe6b78140839b5e2099", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25420064", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25420064/SRR25420064", "size": "152719124283", "date": "2023-08-15 14:50:10", "md5": "c7de9d34cf906b3270b950d026771cde", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25420064.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos5/sra-pub-zq-11/SRR025/25420/SRR25420064/SRR25420064.lite.1", "size": "87789936863", "date": "2023-08-20 16:30:51", "md5": "94728edf5bb2eba8e3bdda0d5d4f5f27", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]