EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02280
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02280
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02280"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "African Caribbean in Barbados"}, {"TAG": "family id", "VALUE": "BB23"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02280
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02280
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02280-46c-1_S13_L002_R1_001.fastq.gz", "size": "13800542643", "date": "2024-09-10 04:13:33", "md5": "32a2b9acc653c209c9b1aedb92c99517", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02280-46c-1_S13_L002_R2_001.fastq.gz", "size": "14622584983", "date": "2024-09-10 04:14:05", "md5": "a71be9e8c32ce7bbe34cb1dd8b9728bc", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613711", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613711/SRR30613711", "size": "18979174422", "date": "2024-09-10 04:18:55", "md5": "3aac6f47011ce6dbe73e5b8e7f03d8a0", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613711.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613711/SRR30613711.lite.1", "size": "13884543846", "date": "2024-09-10 04:42:11", "md5": "75be25fc31ac764f2b6095b562d20f11", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]