EXPERIMENT_TITLE: GSM7610212: intact Hi-C from ovary (ENCLB085QMG); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS941QPR
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS941QPR"}, {"TAG": "sample type", "VALUE": "tissue"}, {"TAG": "tissue", "VALUE": "ovary"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "health state", "VALUE": "DM: no; HTN: no; CAD: no"}, {"TAG": "dev_stage", "VALUE": "adult"}, {"TAG": "age", "VALUE": "41 year"}, {"TAG": "donor ID", "VALUE": "ENCDO575WHY"}, {"TAG": "lab", "VALUE": "Michael Snyder, Stanford"}, {"TAG": "source", "VALUE": "Yiing Lin, MD, PhD"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS941QPR
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS941QPR
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419439.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos5/sra-pub-zq-16/SRR025/25419/SRR25419439/SRR25419439.lite.1", "size": "72402105039", "date": "2023-08-10 13:55:23", "md5": "40dda197276f9bb45ecbb5df6ee75f56", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419439", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419439/SRR25419439", "size": "139877841772", "date": "2023-08-05 12:38:54", "md5": "b415f495187de4117fb45e7d74e74228", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null], "@attributes": {"cluster": "public", "filename": "ENCFF186MTT.fastq.gz", "url": "https://sra-pub-src-2.s3.amazonaws.com/SRR25419439/ENCFF186MTT.fastq.gz.1", "size": "169042815751", "date": "2023-08-05 12:00:40", "md5": "626ccbccebb4d5275dc6d70734e79bfa", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]