EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02280
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02280
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02280"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "African Caribbean in Barbados"}, {"TAG": "family id", "VALUE": "BB23"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02280
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02280
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02280-46c-2_S14_L004_R1_001.fastq.gz", "size": "11758041606", "date": "2024-09-10 03:59:52", "md5": "5f57aa02380e805bc1f920375134120e", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02280-46c-2_S14_L004_R2_001.fastq.gz", "size": "12393732088", "date": "2024-09-10 04:00:21", "md5": "b5f1200035b49bd5e531c7c02b510648", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613698", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613698/SRR30613698", "size": "16152950841", "date": "2024-09-10 04:05:27", "md5": "36ea4c8206d15cd9d0bb1dedf24cfdb1", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613698.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613698/SRR30613698.lite.1", "size": "11612168049", "date": "2024-09-10 04:41:22", "md5": "b9fe0f2d1b7b3769c411dbc761690ba9", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]