EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG01261
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG01261"}, {"TAG": "age", "VALUE": "No data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Colombian in Medellin, Colombia"}, {"TAG": "family id", "VALUE": "CLM17"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30310832.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30310/SRR30310832/SRR30310832.lite.1", "size": "57664987130", "date": "2024-08-22 05:32:07", "md5": "c8e8d4dff88f2a06b932eb5b0bc08f4c", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30310832", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30310832/SRR30310832", "size": "90920674430", "date": "2024-08-22 04:50:37", "md5": "9928525b9b2f139663e2ed5441a76dfd", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG01261-1_S2_L001_R2_001.fastq.gz", "size": "68466454424", "date": "2024-08-22 04:11:35", "md5": "2f97bed679a6d7d8e80f9121eeefed2d", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG01261-1_S2_L001_R1_001.fastq.gz", "size": "64949051763", "date": "2024-08-22 03:55:44", "md5": "b20d87ed95f74108f3fc7a69266e56f0", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]