EXPERIMENT_TITLE: GSM7657983: intact Hi-C from PC-9 (ENCLB037ELF); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS829YOF
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS829YOF"}, {"TAG": "sample type", "VALUE": "cell line"}, {"TAG": "cell line", "VALUE": "PC-9"}, {"TAG": "sex", "VALUE": "unknown"}, {"TAG": "dev_stage", "VALUE": "unknown"}, {"TAG": "donor ID", "VALUE": "ENCDO647UHQ"}, {"TAG": "lab", "VALUE": "Mats Ljungman, UMichigan"}, {"TAG": "source", "VALUE": "Sigma"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS829YOF
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS829YOF
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF256VFF.fastq.gz", "size": "76633298330", "date": "2023-08-12 18:05:16", "md5": "6b4c0b994c67186c2997abdb1f7558d8", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25420043", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25420043/SRR25420043", "size": "58881960788", "date": "2023-08-12 18:16:02", "md5": "129d607f3db55cd38eface5bcd206efb", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25420043.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-zq-22/SRR025/25420/SRR25420043/SRR25420043.lite.1", "size": "31541515897", "date": "2023-08-17 20:28:48", "md5": "75ef4fc80e3038a51b9a152d775e207f", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]