EXPERIMENT_TITLE: GSM7610352: intact Hi-C from activated naive CD4-positive, alpha-beta T cell (ENCLB177OMZ); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS190INC
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS190INC"}, {"TAG": "sample type", "VALUE": "primary cell"}, {"TAG": "cell type", "VALUE": "activated naive CD4-positive, alpha-beta T cell"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "dev_stage", "VALUE": "adult"}, {"TAG": "age", "VALUE": "43 year"}, {"TAG": "donor ID", "VALUE": "ENCDO791UJG"}, {"TAG": "lab", "VALUE": "Charles Lee"}, {"TAG": "source", "VALUE": "AllCells"}, {"TAG": "treatments", "VALUE": "treatment_term_name: anti-CD3 and anti-CD28 coated beads; treatment_type: antibody; duration: 36; duration_units: hour;"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS190INC
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS190INC
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419462.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos4/sra-pub-zq-7/SRR025/25419/SRR25419462/SRR25419462.lite.1", "size": "87631406430", "date": "2023-08-11 13:32:08", "md5": "0eeda93fd6ddbcca9f0569d6e15b830b", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419462", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419462/SRR25419462", "size": "193647713058", "date": "2023-08-06 10:39:26", "md5": "aaa8d191169bd4c07656712c8c599f00", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF893OTN.fastq.gz", "size": "155468650264", "date": "2023-08-06 09:43:09", "md5": "73f1a2b41d446d88eddb37fb1e9c00ef", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]