EXPERIMENT_TITLE: GSM7657993: intact Hi-C from testis (ENCLB834QSS); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS110JMD
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS110JMD"}, {"TAG": "sample type", "VALUE": "tissue"}, {"TAG": "tissue", "VALUE": "testis"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "dev_stage", "VALUE": "adult"}, {"TAG": "age", "VALUE": "54 year"}, {"TAG": "donor ID", "VALUE": "ENCDO451RUA"}, {"TAG": "lab", "VALUE": "Erez Aiden, Baylor"}, {"TAG": "source", "VALUE": "Kristin Ardlie"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS110JMD
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS110JMD
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25420057.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos1/sra-pub-zq-38/SRR025/25420/SRR25420057/SRR25420057.lite.1", "size": "84687996808", "date": "2023-08-18 16:05:16", "md5": "9009b3304c36cc34736639c090f27a83", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25420057", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25420057/SRR25420057", "size": "169231893032", "date": "2023-08-13 14:57:03", "md5": "4aadca49255682434fbaaeaa7433e209", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF827HNI.fastq.gz", "size": "135749924633", "date": "2023-08-13 14:11:41", "md5": "4c81a93231eae318bbd174826121317d", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]