EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG04184
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG04184
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG04184"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Bengali in Bangladesh"}, {"TAG": "family id", "VALUE": "BD61"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG04184
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG04184
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG04184-39a-1_S11_L002_R1_001.fastq.gz", "size": "6791049214", "date": "2024-09-10 03:54:27", "md5": "19eda8963db996a89e57eae248a25fc6", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG04184-39a-1_S11_L002_R2_001.fastq.gz", "size": "7140575021", "date": "2024-09-10 03:54:46", "md5": "5d6be683462fd0b7380dcd68f7f6a1df", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613679", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613679/SRR30613679", "size": "9298712403", "date": "2024-09-10 03:58:17", "md5": "3fb2e1d048cb5ef0449473e78134dea1", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613679.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613679/SRR30613679.lite.1", "size": "6693774199", "date": "2024-09-10 04:42:03", "md5": "3e2e101b5a94970ae7615099fb46c86c", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]