EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG00126
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG00126"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "collection_date", "VALUE": "2023-04-18"}, {"TAG": "geo_loc_name", "VALUE": "United Kingdom"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30310819.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30310/SRR30310819/SRR30310819.lite.1", "size": "16913696457", "date": "2024-08-22 03:02:10", "md5": "36668483973e08a2d51dd50b0cc73a6f", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30310819", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30310819/SRR30310819", "size": "25527733573", "date": "2024-08-21 23:44:49", "md5": "4c2c7be9f2ad1cd55b14b883f9ba8e7d", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG00126-2_FC1_S4_L004_R2_001.fastq.gz", "size": "18879141939", "date": "2024-08-21 23:39:01", "md5": "e76a6f2611317fe248ea83edd80fea3d", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG00126-2_FC1_S4_L004_R1_001.fastq.gz", "size": "18658567708", "date": "2024-08-21 23:38:23", "md5": "af99f13962a108fc2010b42ed35042ed", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]