EXPERIMENT_TITLE: GSM7611108: intact Hi-C from MCF 10A (ENCLB819VPQ); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS436GYV
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS436GYV"}, {"TAG": "sample type", "VALUE": "cell line"}, {"TAG": "cell line", "VALUE": "MCF 10A"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "health state", "VALUE": "fibrocystic disease"}, {"TAG": "dev_stage", "VALUE": "adult"}, {"TAG": "age", "VALUE": "36 year"}, {"TAG": "donor ID", "VALUE": "ENCDO000AAP"}, {"TAG": "lab", "VALUE": "Mats Ljungman, UMichigan"}, {"TAG": "source", "VALUE": "ATCC"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS436GYV
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS436GYV
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419623.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos5/sra-pub-zq-11/SRR025/25419/SRR25419623/SRR25419623.lite.1", "size": "14289527340", "date": "2023-08-13 05:31:45", "md5": "4eb2f069efe5ffe9ae9d63bb3a96181c", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419623", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419623/SRR25419623", "size": "26422320538", "date": "2023-08-07 22:37:12", "md5": "26c707129ba216c8885ab6838e25b921", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF204HVQ.fastq.gz", "size": "34172941076", "date": "2023-08-07 22:10:10", "md5": "5230f5ed4f35e0880a94579591a4ab0e", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]