EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG04184
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG04184
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG04184"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Bengali in Bangladesh"}, {"TAG": "family id", "VALUE": "BD61"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG04184
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG04184
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG04184-39a-1_S11_L003_R1_001.fastq.gz", "size": "7071225605", "date": "2024-09-10 04:01:04", "md5": "9d8f6b6437a10549b140a153b63a8548", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG04184-39a-1_S11_L003_R2_001.fastq.gz", "size": "7428190434", "date": "2024-09-10 03:59:08", "md5": "14035475c157528d03eee3f31b0d7112", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613678", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613678/SRR30613678", "size": "9699206465", "date": "2024-09-10 04:07:44", "md5": "9171c71604df46e18ceaa81a4b63e66f", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613678.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613678/SRR30613678.lite.1", "size": "6864590561", "date": "2024-09-10 04:39:28", "md5": "8b9d4a7962ce19bf7131d5c5c8e69b36", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]