EXPERIMENT_TITLE: GSM7657972: intact Hi-C from posterior vena cava (ENCLB927DHX); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS193ENT
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS193ENT"}, {"TAG": "sample type", "VALUE": "tissue"}, {"TAG": "tissue", "VALUE": "posterior vena cava"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "health state", "VALUE": "DM: yes; HTN: yes; CAD: no"}, {"TAG": "dev_stage", "VALUE": "adult"}, {"TAG": "age", "VALUE": "59 year"}, {"TAG": "donor ID", "VALUE": "ENCDO856ZOJ"}, {"TAG": "lab", "VALUE": "Michael Snyder, Stanford"}, {"TAG": "source", "VALUE": "Yiing Lin, MD, PhD"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS193ENT
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS193ENT
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF948DRE.fastq.gz", "size": "187529334960", "date": "2023-08-14 16:54:36", "md5": "45fa7a74ca2b15f170500e7131ec6934", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419999", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419999/SRR25419999", "size": "152430039594", "date": "2023-08-14 17:38:48", "md5": "d677d5becb657a1e7f56ddc90ef235cb", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419999.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos4/sra-pub-zq-5/SRR025/25419/SRR25419999/SRR25419999.lite.1", "size": "83715254430", "date": "2023-08-19 19:15:25", "md5": "a509d671df6b9229687348a3d1cfb6d7", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]