EXPERIMENT_TITLE: GSM7622006: intact Hi-C from heart left ventricle (ENCLB163XVT); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS653TLO
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS653TLO"}, {"TAG": "sample type", "VALUE": "tissue"}, {"TAG": "tissue", "VALUE": "heart left ventricle"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "health state", "VALUE": "ischemic (EF 25% LVEDD 5.7; RV mildly dilated, moderate dysfunction)"}, {"TAG": "dev_stage", "VALUE": "adult"}, {"TAG": "age", "VALUE": "69 year"}, {"TAG": "donor ID", "VALUE": "ENCDO477WED"}, {"TAG": "lab", "VALUE": "Michael Snyder, Stanford"}, {"TAG": "source", "VALUE": "Shin Lin"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS653TLO
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS653TLO
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419673.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-zq-22/SRR025/25419/SRR25419673/SRR25419673.lite.1", "size": "82647272657", "date": "2023-08-30 07:19:51", "md5": "f825919c0b02c325b9ed8142e20fa620", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419673", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419673/SRR25419673", "size": "142737028461", "date": "2023-08-25 05:31:29", "md5": "8628335a4dfb9d8ec0422e501f045d78", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF470XLP.fastq.gz", "size": "176394850554", "date": "2023-08-25 04:30:17", "md5": "b3658ba2ff4cd9b89c1c13f0f0497246", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]