EXPERIMENT_TITLE: GSM7622042: intact Hi-C from pancreas (ENCLB029FWJ); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS799RGS
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS799RGS"}, {"TAG": "sample type", "VALUE": "tissue"}, {"TAG": "tissue", "VALUE": "pancreas"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "health state", "VALUE": "DM: yes; HTN: yes; CAD: no"}, {"TAG": "dev_stage", "VALUE": "adult"}, {"TAG": "age", "VALUE": "59 year"}, {"TAG": "donor ID", "VALUE": "ENCDO856ZOJ"}, {"TAG": "lab", "VALUE": "Michael Snyder, Stanford"}, {"TAG": "source", "VALUE": "Yiing Lin, MD, PhD"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS799RGS
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS799RGS
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419706.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-zq-22/SRR025/25419/SRR25419706/SRR25419706.lite.1", "size": "88439425830", "date": "2023-08-30 07:45:56", "md5": "068de5114c064e3ca0897d7fbf8948e1", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419706", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419706/SRR25419706", "size": "168851294846", "date": "2023-08-25 05:07:03", "md5": "14019c2c8dff28cf9d3a33bea8188593", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF970ECR.fastq.gz", "size": "206355967262", "date": "2023-08-25 04:14:23", "md5": "1a1708204f883d5fb6deee674b62faab", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]