EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG03831
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG03831
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG03831"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Bengali in Bangladesh"}, {"TAG": "family id", "VALUE": "BD27"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG03831
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG03831
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG03831-37a-1_S15_L004_R1_001.fastq.gz", "size": "10709174936", "date": "2024-09-10 04:21:50", "md5": "bfb16ec6350b52f17015008491fd2d96", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG03831-37a-1_S15_L004_R2_001.fastq.gz", "size": "10237070750", "date": "2024-09-10 04:19:06", "md5": "9959e12c3b1857e29e0cd2efaaff64e9", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613863", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613863/SRR30613863", "size": "14265330861", "date": "2024-09-10 04:38:40", "md5": "0e5b5d566c29d3ad87c9eb38cceca705", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613863.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613863/SRR30613863.lite.1", "size": "9260872029", "date": "2024-09-10 06:29:00", "md5": "6985b184bb2632ecea9560e539bc027c", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]