EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02922
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02922"}, {"TAG": "age", "VALUE": "No data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Esan in Nigeria"}, {"TAG": "family id", "VALUE": "NG06"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02922-2_S20i_L003_R1_001.fastq.gz", "size": "13196569470", "date": "2024-08-14 21:27:11", "md5": "662593635002de81703aca8d88f025de", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02922-2_S20i_L003_R2_001.fastq.gz", "size": "14126482912", "date": "2024-08-14 21:27:54", "md5": "2cd21e6e17124e5554b2c9db43dac7de", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30242393", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30242393/SRR30242393", "size": "18333219725", "date": "2024-08-14 21:29:36", "md5": "d3f8781ddb4176c517089afe2f2d65ce", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30242393.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30242/SRR30242393/SRR30242393.lite.1", "size": "13821247925", "date": "2024-08-14 22:51:50", "md5": "99a235453926c82036f050c680adca1c", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]