EXPERIMENT_TITLE: GSM7610371: intact Hi-C from pancreas (ENCLB250LEO); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS502NRJ
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS502NRJ"}, {"TAG": "sample type", "VALUE": "tissue"}, {"TAG": "tissue", "VALUE": "pancreas"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "health state", "VALUE": "DM: no; HTN: no; CAD: no; lungs with moderate emphysema"}, {"TAG": "dev_stage", "VALUE": "adult"}, {"TAG": "age", "VALUE": "61 year"}, {"TAG": "donor ID", "VALUE": "ENCDO186XRB"}, {"TAG": "lab", "VALUE": "Michael Snyder, Stanford"}, {"TAG": "source", "VALUE": "Yiing Lin, MD, PhD"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS502NRJ
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS502NRJ
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419534.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos2/sra-pub-zq-18/SRR025/25419/SRR25419534/SRR25419534.lite.1", "size": "71803771975", "date": "2023-09-01 05:24:50", "md5": "c3653b686d6b5c7dcf1163976ce885d9", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419534", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419534/SRR25419534", "size": "154110952533", "date": "2023-08-26 22:26:36", "md5": "b4248bbffda4e2d215188e762630286b", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF125CAM.fastq.gz", "size": "187002573880", "date": "2023-08-26 21:36:23", "md5": "187b982bb341a5a619ed42a8df42224d", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]