EXPERIMENT_TITLE: GSM7610388: intact Hi-C from Calu3 (ENCLB212OUE); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS151RPO
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS151RPO"}, {"TAG": "sample type", "VALUE": "cell line"}, {"TAG": "cell line", "VALUE": "Calu3"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "health state", "VALUE": "Lung adenocarcinoma"}, {"TAG": "dev_stage", "VALUE": "adult"}, {"TAG": "age", "VALUE": "25 year"}, {"TAG": "donor ID", "VALUE": "ENCDO109DGE"}, {"TAG": "lab", "VALUE": "Mats Ljungman, UMichigan"}, {"TAG": "source", "VALUE": "ATCC"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS151RPO
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS151RPO
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419553.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos4/sra-pub-zq-3/SRR025/25419/SRR25419553/SRR25419553.lite.1", "size": "10537429994", "date": "2023-08-09 03:16:10", "md5": "24766d07f895faa2add8337d02e61b31", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419553", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419553/SRR25419553", "size": "21518253715", "date": "2023-08-04 02:03:40", "md5": "767d81db9f05a39a888f5cda68f780c7", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF976HXI.fastq.gz", "size": "27799909892", "date": "2023-08-04 01:54:14", "md5": "37f360f66876302b6f5aa75168567d67", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]