EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02615
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02615
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02615"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Gambian in Western Division, The Gambia - Mandinka"}, {"TAG": "family id", "VALUE": "GB29"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02615
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02615
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02615-25b-2_S4_L001_R1_001.fastq.gz", "size": "9354466156", "date": "2024-09-10 03:51:33", "md5": "78c66123245cbc8d9383567c68a14948", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02615-25b-2_S4_L001_R2_001.fastq.gz", "size": "8495187623", "date": "2024-09-10 03:51:13", "md5": "2cbff37fee0d0620e98bfcc7b5005b53", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613781", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613781/SRR30613781", "size": "12206232496", "date": "2024-09-10 03:53:54", "md5": "d1a552db26c60f49b8047fd36fc99e0c", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613781.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613781/SRR30613781.lite.1", "size": "8296634704", "date": "2024-09-10 04:41:59", "md5": "634a0677622ca957de502585ed2ad983", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]