EXPERIMENT_TITLE: GSM7656208: intact Hi-C from mammary epithelial cell (ENCLB057VTC); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS131DIO
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS131DIO"}, {"TAG": "sample type", "VALUE": "primary cell"}, {"TAG": "cell type", "VALUE": "mammary epithelial cell"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "dev_stage", "VALUE": "adult"}, {"TAG": "age", "VALUE": "19 year"}, {"TAG": "donor ID", "VALUE": "ENCDO955XOD"}, {"TAG": "lab", "VALUE": "Mats Ljungman, UMichigan"}, {"TAG": "source", "VALUE": "Lonza"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS131DIO
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS131DIO
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF404CIA.fastq.gz", "size": "73096191889", "date": "2023-08-11 18:22:34", "md5": "6071791183d6e4cb8352472f8370219c", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419912.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos2/sra-pub-zq-18/SRR025/25419/SRR25419912/SRR25419912.lite.1", "size": "29082769149", "date": "2023-08-16 19:04:21", "md5": "a1b078502711eb6a01451b1a7402a169", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419912", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419912/SRR25419912", "size": "56710145740", "date": "2023-08-11 18:33:46", "md5": "60861fa95b02983e6c33355a3c974608", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}]