EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG01943
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG01943
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG01943"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Peruvian in Lima, Peru"}, {"TAG": "family id", "VALUE": "PEL016"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG01943
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG01943
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613729.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613729/SRR30613729.lite.1", "size": "12469262111", "date": "2024-09-10 04:41:01", "md5": "176814541f517a164c215a737c7dc0fa", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613729", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613729/SRR30613729", "size": "17352806895", "date": "2024-09-10 04:07:36", "md5": "1a2ce3e4555b7f7e0a815381fbee2116", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG01943-51f-1_S15_L004_R2_001.fastq.gz", "size": "13398634299", "date": "2024-09-10 04:04:26", "md5": "ba4d4747197ed8c625218023bb6549c5", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG01943-51f-1_S15_L004_R1_001.fastq.gz", "size": "12596871824", "date": "2024-09-10 04:04:56", "md5": "07311043b5cbf022dccb12285b03187e", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]