EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG01981
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG01981
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG01981"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Peruvian in Lima, Peru"}, {"TAG": "family id", "VALUE": "PEL27"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG01981
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG01981
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG01981-51d-2_S2_L001_R1_001.fastq.gz", "size": "21331306581", "date": "2024-09-10 05:26:15", "md5": "9ffe2665032eeceb4a5507cfea75da24", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG01981-51d-2_S2_L001_R2_001.fastq.gz", "size": "25446789879", "date": "2024-09-10 05:32:32", "md5": "e4ab86226492ea42bd577daa419bb874", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613926", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613926/SRR30613926", "size": "31749637502", "date": "2024-09-10 05:51:27", "md5": "79a82b151e3233d3da2fb115a18a7c09", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613926.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613926/SRR30613926.lite.1", "size": "21204744110", "date": "2024-09-10 06:27:23", "md5": "2d2a93c9ae8207f282954fbda2a0607c", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]