EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of NA18983
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "NA18983"}, {"TAG": "age", "VALUE": "No data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Japanese in Tokyo, Japan"}, {"TAG": "family id", "VALUE": "NA18983"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "NA18983-1_S4_L004_R1_001.fastq.gz", "size": "5489434719", "date": "2024-08-14 21:10:07", "md5": "a7757410096419491c94be9e0a7ab8f5", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "NA18983-1_S4_L004_R2_001.fastq.gz", "size": "5656104147", "date": "2024-08-14 21:11:06", "md5": "64bfa3d3014a95de5ff583ad6b144355", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30242509", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30242509/SRR30242509", "size": "7497488789", "date": "2024-08-14 21:13:29", "md5": "a0b647f707d0b1dc479c9748e6577e6a", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30242509.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30242/SRR30242509/SRR30242509.lite.1", "size": "5183605997", "date": "2024-08-14 22:51:27", "md5": "f289358bfaec3878eef3173f3e63b912", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]