EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02135
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02135
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02135"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Kinh in Ho Chi Minh City, Vietnam"}, {"TAG": "family id", "VALUE": "VN081"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02135
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02135
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02135-09a-2_S8_L001_R1_001.fastq.gz", "size": "12050150099", "date": "2024-09-10 04:24:13", "md5": "0f1781b48633b9dc238f7b363d924969", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02135-09a-2_S8_L001_R2_001.fastq.gz", "size": "11801985586", "date": "2024-09-10 04:28:31", "md5": "e8570bbfbe24e72d8683d5fb74bbe0dd", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613717", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613717/SRR30613717", "size": "16095702916", "date": "2024-09-10 04:49:53", "md5": "ac6788e1dd33b7a4efecd51d21652404", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613717.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613717/SRR30613717.lite.1", "size": "11439999524", "date": "2024-09-10 06:24:17", "md5": "cd4ad6ab91811c51a69e28390c1c523e", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]