EXPERIMENT_TITLE: GSM7656189: intact Hi-C from K562 (ENCLB045FEA); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS671OWM
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS671OWM"}, {"TAG": "sample type", "VALUE": "cell line"}, {"TAG": "cell line", "VALUE": "K562"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "health state", "VALUE": "chronic myelogenous leukemia (CML)"}, {"TAG": "dev_stage", "VALUE": "adult"}, {"TAG": "age", "VALUE": "53 year"}, {"TAG": "donor ID", "VALUE": "ENCDO000AAD"}, {"TAG": "lab", "VALUE": "Mats Ljungman, UMichigan"}, {"TAG": "source", "VALUE": "ATCC"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS671OWM
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS671OWM
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419885.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos5/sra-pub-zq-11/SRR025/25419/SRR25419885/SRR25419885.lite.1", "size": "3444162549", "date": "2023-08-13 06:41:53", "md5": "54f7555493ab8e37a47d085727f675be", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419885", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419885/SRR25419885", "size": "6463360293", "date": "2023-08-08 05:27:24", "md5": "4251b5a1ba4119c0cbd10ccc4b54aa78", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF478FKO.fastq.gz", "size": "8238103202", "date": "2023-08-08 05:26:43", "md5": "7d1d0ef40ddd76edc02ab9fdd8187109", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]