EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG00642
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG00642
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG00642"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Puerto Rican in Puerto Rico"}, {"TAG": "family id", "VALUE": "PR04"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG00642
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG00642
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG00642-33b-1_S9_L002_R1_001.fastq.gz", "size": "12111363900", "date": "2024-09-10 04:08:03", "md5": "b927848bc1b63f2175901fb9fc58fe75", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG00642-33b-1_S9_L002_R2_001.fastq.gz", "size": "10978353782", "date": "2024-09-10 04:08:37", "md5": "6becbc1d8f131558b1ceef6a4460328c", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613606", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613606/SRR30613606", "size": "15755601710", "date": "2024-09-10 04:21:53", "md5": "67f42d3637e92b58074046ab4937a6bf", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613606.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613606/SRR30613606.lite.1", "size": "10699095158", "date": "2024-09-10 04:41:03", "md5": "2f9dd6638a012818717c41bb521afe2e", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]