EXPERIMENT_TITLE: GSM7657233: intact Hi-C from right cardiac atrium (ENCLB513JAJ); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS852VTT
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS852VTT"}, {"TAG": "sample type", "VALUE": "tissue"}, {"TAG": "tissue", "VALUE": "right cardiac atrium"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "health state", "VALUE": "DM: no; HTN: yes; CAD: no; lungs with severe emphysema"}, {"TAG": "dev_stage", "VALUE": "adult"}, {"TAG": "age", "VALUE": "60 year"}, {"TAG": "donor ID", "VALUE": "ENCDO520EJG"}, {"TAG": "lab", "VALUE": "Michael Snyder, Stanford"}, {"TAG": "source", "VALUE": "Yiing Lin, MD, PhD"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS852VTT
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS852VTT
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF796FOC.fastq.gz", "size": "2386279546", "date": "2023-08-08 18:06:51", "md5": "6dafac3f7a7e9a41695edf624e05c5e1", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419945", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419945/SRR25419945", "size": "2152823657", "date": "2023-08-08 18:07:23", "md5": "536c713877c3fb3ef6f49d139a99830c", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419945.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos5/sra-pub-zq-11/SRR025/25419/SRR25419945/SRR25419945.lite.1", "size": "1057253306", "date": "2023-08-13 19:00:48", "md5": "7f1ca378fd8e6cecf3e1675f81eac3f7", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]