EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02735
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02735"}, {"TAG": "age", "VALUE": "No data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Punjabi in Lahore,Pakistan"}, {"TAG": "family id", "VALUE": "PK26"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02735-1_S1_L004_R1_001.fastq.gz", "size": "6227587927", "date": "2024-08-21 23:38:56", "md5": "354e44406a3559aa60d794d92cd045bf", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02735-1_S1_L004_R2_001.fastq.gz", "size": "6635129586", "date": "2024-08-21 23:39:13", "md5": "47388cb2b90f0f09dde039241fc68f4c", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30310846.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30310/SRR30310846/SRR30310846.lite.1", "size": "5367903123", "date": "2024-08-22 03:00:32", "md5": "fe57d4e71f34036b9476a5dc22ae2635", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30310846", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30310846/SRR30310846", "size": "8597036099", "date": "2024-08-21 23:40:44", "md5": "f179b672ad1ef0e0a3a35939c294f3e7", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}]