EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG04184
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG04184
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG04184"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Bengali in Bangladesh"}, {"TAG": "family id", "VALUE": "BD61"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG04184
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG04184
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG04184-39a-2_S12_L001_R1_001.fastq.gz", "size": "9307747550", "date": "2024-09-10 04:08:10", "md5": "bdbd7fdc599166927f2c25899c1239e1", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG04184-39a-2_S12_L001_R2_001.fastq.gz", "size": "9743699509", "date": "2024-09-10 04:11:49", "md5": "2986f49f7faea9dfcc1996ca13f860c7", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613676", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613676/SRR30613676", "size": "12619942262", "date": "2024-09-10 04:17:07", "md5": "cd8c1ece71812411a051abaa95817a53", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613676.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613676/SRR30613676.lite.1", "size": "9277591538", "date": "2024-09-10 04:40:23", "md5": "8a81d6f413a7bfb1e07964433a91fd18", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]