EXPERIMENT_TITLE: GSM7657943: intact Hi-C from GM12878 (ENCLB321FJG); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS678NVO
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS678NVO"}, {"TAG": "sample type", "VALUE": "cell line"}, {"TAG": "cell line", "VALUE": "GM12878"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "health state", "VALUE": "unknown"}, {"TAG": "dev_stage", "VALUE": "adult"}, {"TAG": "donor ID", "VALUE": "ENCDO000AAK"}, {"TAG": "lab", "VALUE": "Mats Ljungman, UMichigan"}, {"TAG": "source", "VALUE": "Coriell"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS678NVO
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS678NVO
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF551HAB.fastq.gz", "size": "55365434764", "date": "2023-08-13 18:10:27", "md5": "da259630fe498e8a951176d5ae08f0a7", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419960", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419960/SRR25419960", "size": "51929908233", "date": "2023-08-13 18:27:19", "md5": "18417712b4afe7cd97fca98559999344", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419960.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos1/sra-pub-zq-38/SRR025/25419/SRR25419960/SRR25419960.lite.1", "size": "26034758152", "date": "2023-08-18 19:38:27", "md5": "720a3491239414c4509e43213d6b9a36", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]