EXPERIMENT_TITLE: GSM2825413: Hi-C from SK-N-DZ (ENCLB952BSP); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: not provided
STUDY_DESCRIPTOR_STUDY_ABSTRACT: Summary: We generated a genome-wide interaction map of regulatory elements in human cells (K562, GM12878) using Chromatin Interaction Analysis by Paired-End Tag sequencing (ChIA-PET) experiments targeting six broadly distributed factors.  For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf Overall Design: Chromatin interactions identified by ChIA-PET for 4 different histone modifications, RAD21 and RNAPII in K562 cell line, two biological replicates each.
SAMPLE_TITLE: ENCODE biosample ENCBS520AAA
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "age", "VALUE": "2 year"}, {"TAG": "donor ID", "VALUE": "ENCDO340AAA"}, {"TAG": "dev stage", "VALUE": "child"}, {"TAG": "sample type", "VALUE": "immortalized cell line"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "cell line", "VALUE": "SK-N-DZ"}, {"TAG": "treatments", "VALUE": "treatment_term_id: CHEBI:28262; treatment_term_name: dimethyl sulfoxide; treatment_type: chemical; duration: 72; duration_units: hour;"}, {"TAG": "lab", "VALUE": "John Stamatoyannopoulos, UW"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS520AAA
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS520AAA
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