EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02602
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02602
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02602"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Punjabi in Lahore, Pakistan"}, {"TAG": "family id", "VALUE": "PK09"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02602
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02602
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02602-11a-1_S11_L004_R1_001.fastq.gz", "size": "15449005613", "date": "2024-09-10 04:04:19", "md5": "f02a843324f9e9c274386a527327c3d1", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02602-11a-1_S11_L004_R2_001.fastq.gz", "size": "15300094135", "date": "2024-09-10 04:02:55", "md5": "4760507fd52227e898e5c4ddf8a849f6", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613647", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613647/SRR30613647", "size": "20772876179", "date": "2024-09-10 04:14:42", "md5": "0484cd036324ec8a8f3df081d4d11022", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613647.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613647/SRR30613647.lite.1", "size": "14650160363", "date": "2024-09-10 04:41:00", "md5": "4513f37193b41d8a1cdb0aaf0ec9a386", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]