EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02280
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02280
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02280"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "African Caribbean in Barbados"}, {"TAG": "family id", "VALUE": "BB23"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02280
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02280
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02280-46c-1_S13_L004_R1_001.fastq.gz", "size": "13467264722", "date": "2024-09-10 04:28:00", "md5": "c6994f7370463fabd3db58ebe64a7832", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02280-46c-1_S13_L004_R2_001.fastq.gz", "size": "14070134290", "date": "2024-09-10 04:34:47", "md5": "3c8eb8cbd25afd9aaf8d844e375ee051", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613709", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613709/SRR30613709", "size": "18408108987", "date": "2024-09-10 05:04:17", "md5": "a2684ae292da5dd01902000682cb9bfc", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613709.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613709/SRR30613709.lite.1", "size": "13346196687", "date": "2024-09-10 06:27:14", "md5": "6c63225258204aa380a8e1bee21dea3d", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]