EXPERIMENT_TITLE: HiC of homo sapiens: U251 DMSO
STUDY_DESCRIPTOR_STUDY_ABSTRACT: HiC, ChIP-seq, RNA-seq data of U251 glioma cells under DMSO and TMZ treatment respectively.
SAMPLE_TITLE: HiC_DMSO-8
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HiC"}, {"TAG": "age", "VALUE": "unkown"}, {"TAG": "biomaterial_provider", "VALUE": "Bohan Chen"}, {"TAG": "collection_date", "VALUE": "2023"}, {"TAG": "geo_loc_name", "VALUE": "China"}, {"TAG": "sex", "VALUE": "not collected"}, {"TAG": "tissue", "VALUE": "GBM"}, {"TAG": "cell_line", "VALUE": "U251"}, {"TAG": "treatment", "VALUE": "HiC_DMSO-8"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: HiC_DMSO-8
RUN_SET_RUN_Pool_Member_@attributes_sample_title: HiC_DMSO-8
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "FCHJJGTCCXY_L8_CWHPE18020033_1.fastq.gz", "size": "3175029722", "date": "2023-12-04 14:18:49", "md5": "037b341de2db774792cd589b630cae8d", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "FCHJJGTCCXY_L8_CWHPE18020033_2.fastq.gz", "size": "3483305767", "date": "2023-12-04 14:19:27", "md5": "4bf120105526fe192a73d3b90ff4414b", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR27043130", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR27043130/SRR27043130", "size": "4928751646", "date": "2023-12-04 14:21:09", "md5": "9ccec4946f2ebc028fecd7a6b24eee4e", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR27043130.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR027/27043/SRR27043130/SRR27043130.lite.1", "size": "3129765326", "date": "2023-12-04 16:42:50", "md5": "7503c079d1a728ca36c90cb4daa08c9d", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]