EXPERIMENT_TITLE: GSM7646186: intact Hi-C from MCF-7 (ENCLB367TCM); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS885VEP
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS885VEP"}, {"TAG": "sample type", "VALUE": "cell line"}, {"TAG": "cell line", "VALUE": "MCF-7"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "health state", "VALUE": "breast cancer (adenocarcinoma)"}, {"TAG": "dev_stage", "VALUE": "adult"}, {"TAG": "age", "VALUE": "69 year"}, {"TAG": "donor ID", "VALUE": "ENCDO000AAE"}, {"TAG": "lab", "VALUE": "Mats Ljungman, UMichigan"}, {"TAG": "source", "VALUE": "ATCC"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS885VEP
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS885VEP
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419780.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos2/sra-pub-zq-18/SRR025/25419/SRR25419780/SRR25419780.lite.1", "size": "41603735676", "date": "2023-08-16 20:57:19", "md5": "73c9209d1f8e1b9d48f4730e411c00bc", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419780", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419780/SRR25419780", "size": "83749471261", "date": "2023-08-11 19:29:38", "md5": "e9986a1e2dceae8bca77b39b84dbd4e5", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF861JOT.fastq.gz", "size": "106697864035", "date": "2023-08-11 19:03:01", "md5": "02647784a89d1cc1409e871d3a2389f7", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]