EXPERIMENT_TITLE: GSM7598120: intact Hi-C from sigmoid colon (ENCLB970PUE); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS451ETF
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS451ETF"}, {"TAG": "sample type", "VALUE": "tissue"}, {"TAG": "tissue", "VALUE": "sigmoid colon"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "dev_stage", "VALUE": "adult"}, {"TAG": "age", "VALUE": "53 year"}, {"TAG": "donor ID", "VALUE": "ENCDO793LXB"}, {"TAG": "lab", "VALUE": "Erez Aiden, Baylor"}, {"TAG": "source", "VALUE": "Kristin Ardlie"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS451ETF
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS451ETF
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419416.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos5/sra-pub-zq-16/SRR025/25419/SRR25419416/SRR25419416.lite.1", "size": "53392973271", "date": "2023-08-10 17:42:55", "md5": "cb59f65b9ed6fe05ac6ee0e30b508417", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419416", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419416/SRR25419416", "size": "113354150700", "date": "2023-08-05 15:05:37", "md5": "bb8da9f04e54fe559300d171b92df1a2", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF850VEZ.fastq.gz", "size": "97150953577", "date": "2023-08-05 14:33:50", "md5": "f4e4fec2452c17a967be1e35906b87c3", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]