EXPERIMENT_TITLE: GSM7610365: intact Hi-C from IMR-90 (ENCLB493FNH); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS785QWQ
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS785QWQ"}, {"TAG": "sample type", "VALUE": "cell line"}, {"TAG": "cell line", "VALUE": "IMR-90"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "health state", "VALUE": "unknown"}, {"TAG": "dev_stage", "VALUE": "embryonic"}, {"TAG": "age", "VALUE": "16 week"}, {"TAG": "donor ID", "VALUE": "ENCDO000AAX"}, {"TAG": "lab", "VALUE": "Mats Ljungman, UMichigan"}, {"TAG": "source", "VALUE": "ATCC"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS785QWQ
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS785QWQ
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419527.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos5/sra-pub-zq-11/SRR025/25419/SRR25419527/SRR25419527.lite.1", "size": "62172658688", "date": "2023-08-13 05:52:43", "md5": "1d0a9d5300425bdd8d4b1f7b03b421f7", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419527", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419527/SRR25419527", "size": "120564359056", "date": "2023-08-08 04:46:34", "md5": "15e9ecdfe627b10623edf1fc5036089a", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF287AGV.fastq.gz", "size": "156148400156", "date": "2023-08-08 04:12:47", "md5": "4255ede9c314c7995962e01cddef4012", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]