EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02300
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02300
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02300"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Peruvian in Lima, Peru"}, {"TAG": "family id", "VALUE": "PEL52"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02300
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02300
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02300-42a-2_S22_L001_R1_001.fastq.gz", "size": "11153298477", "date": "2024-09-10 03:55:33", "md5": "f92d979c5078648ca9cdd3133503e90a", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02300-42a-2_S22_L001_R2_001.fastq.gz", "size": "11656997967", "date": "2024-09-10 03:55:53", "md5": "2229db993a144a22c2cac498c242c4cf", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613640", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613640/SRR30613640", "size": "15180864894", "date": "2024-09-10 03:58:40", "md5": "066b134ac7515ff94258808654796a70", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613640.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613640/SRR30613640.lite.1", "size": "11066276958", "date": "2024-09-10 04:44:30", "md5": "97cf3b2539d9e34c42c4bf553688d216", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]