EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG03669
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG03669
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG03669"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Punjabi in Lahore, Pakistan"}, {"TAG": "family id", "VALUE": "PK58"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG03669
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG03669
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG03669-26a-2_S4_L001_R1_001.fastq.gz", "size": "6892482487", "date": "2024-09-10 04:01:08", "md5": "c171e6d9b816f5886de2dec696d67bef", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG03669-26a-2_S4_L001_R2_001.fastq.gz", "size": "6942916397", "date": "2024-09-10 03:59:04", "md5": "6e92e71aa61295e117afde724b1910e5", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613619", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613619/SRR30613619", "size": "9221626043", "date": "2024-09-10 04:09:26", "md5": "877c0f84d71b61c2d1800f3bf6c8decf", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613619.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613619/SRR30613619.lite.1", "size": "6904831787", "date": "2024-09-10 04:40:13", "md5": "3dc585a31f426c3ab44f9a238c99b438", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]