EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02976
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02976"}, {"TAG": "age", "VALUE": "No data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Esan in Nigeria"}, {"TAG": "family id", "VALUE": "NG24"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02976-2_S14_L001_R1_001.fastq.gz", "size": "6893523546", "date": "2024-08-14 21:05:03", "md5": "d93134b6cfa001f9005d426bf10397c7", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02976-2_S14_L001_R2_001.fastq.gz", "size": "7086148034", "date": "2024-08-14 21:04:51", "md5": "242c852e96ba33f2011afb6354eccc43", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30242378", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30242378/SRR30242378", "size": "9420946719", "date": "2024-08-14 21:06:19", "md5": "aac150cb385421e7b93f430af53e5b55", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30242378.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30242/SRR30242378/SRR30242378.lite.1", "size": "6332223599", "date": "2024-08-14 22:47:08", "md5": "7b88f3a1310bea5e30bdca3ddcacd160", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]