EXPERIMENT_TITLE: Panc10.05 Hi-C
STUDY_DESCRIPTOR_STUDY_ABSTRACT: We sequenced the Hi-C libraries generated from PANC-1, Panc10.05, PATU-8988T and PATU-8988S cell lines to study the genomic interactions and enhancer hijacking events in these cells.
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "patient"}, {"TAG": "age", "VALUE": "adult"}, {"TAG": "biomaterial_provider", "VALUE": "ATCC"}, {"TAG": "collection_date", "VALUE": "2023-04"}, {"TAG": "geo_loc_name", "VALUE": "USA"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "head-of-the-pancreas"}, {"TAG": "cell_line", "VALUE": "Panc10.05"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null], "@attributes": {"cluster": "public", "filename": "PANC1005_CKDL230019751-1A_225MCVLT3_L1_2.fq.gz", "url": "https://sra-pub-src-1.s3.amazonaws.com/SRR26685716/PANC1005_CKDL230019751-1A_225MCVLT3_L1_2.fq.gz.1", "size": "90099518077", "date": "2023-11-06 21:28:47", "md5": "ebdd14b249b99751353d39ae93d5489a", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": [null, null], "@attributes": {"cluster": "public", "filename": "PANC1005_CKDL230019751-1A_225MCVLT3_L1_1.fq.gz", "url": "https://sra-pub-src-1.s3.amazonaws.com/SRR26685716/PANC1005_CKDL230019751-1A_225MCVLT3_L1_1.fq.gz.1", "size": "88712593718", "date": "2023-11-06 21:04:25", "md5": "dabc84cc72ebdbc3470ddebeda572576", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]