EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02602
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02602
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02602"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Punjabi in Lahore, Pakistan"}, {"TAG": "family id", "VALUE": "PK09"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02602
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02602
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02602-11a-1_S11_L002_R1_001.fastq.gz", "size": "15750034228", "date": "2024-09-10 04:24:52", "md5": "6bf73bf9704ba718b826ad98a56dbb26", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02602-11a-1_S11_L002_R2_001.fastq.gz", "size": "15632138843", "date": "2024-09-10 04:21:07", "md5": "3dc47baeb625858707b9ae312eccc375", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613645", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613645/SRR30613645", "size": "21170885442", "date": "2024-09-10 04:32:06", "md5": "9ee3a90cd86cc86fee643053f88df4ab", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613645.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613645/SRR30613645.lite.1", "size": "14960424562", "date": "2024-09-10 04:47:00", "md5": "3a71dfd419e4635202c49117a7064bb4", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]