EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02071
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02071
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02071"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Kinh in Ho Chi Minh City, Vietnam"}, {"TAG": "family id", "VALUE": "VN065"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02071
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02071
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02071-10a-2_S10_L003_R1_001.fastq.gz", "size": "17261039450", "date": "2024-09-10 04:29:37", "md5": "316c6e765eaa214129d49ad66c7d1b9d", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02071-10a-2_S10_L003_R2_001.fastq.gz", "size": "17051365625", "date": "2024-09-10 04:32:53", "md5": "1a1cad36988ab188057642c39bffe79a", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613802", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613802/SRR30613802", "size": "23128895259", "date": "2024-09-10 04:51:41", "md5": "3e15453272bf6423c6b49c36f6841b27", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613802.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613802/SRR30613802.lite.1", "size": "16302703487", "date": "2024-09-10 06:27:18", "md5": "40ece9ac57ea6f51785286a84551ac28", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]