EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02135
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02135
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02135"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Kinh in Ho Chi Minh City, Vietnam"}, {"TAG": "family id", "VALUE": "VN081"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02135
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02135
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02135-09a-1_S7_L002_R1_001.fastq.gz", "size": "13393332453", "date": "2024-09-10 04:01:29", "md5": "0a223634fd327f912e55047d60c22d0e", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02135-09a-1_S7_L002_R2_001.fastq.gz", "size": "13354839628", "date": "2024-09-10 04:01:52", "md5": "c5964c5eaa37f746e6f8d3a829fe149c", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613720", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613720/SRR30613720", "size": "18031465201", "date": "2024-09-10 04:04:11", "md5": "2396f7f46d5fc6bf07ef8f04e7a91af0", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613720.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613720/SRR30613720.lite.1", "size": "12653467785", "date": "2024-09-10 04:41:59", "md5": "c8bd9dc23fb2b5a6f9772a3608f66959", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]