EXPERIMENT_TITLE: GSM2828922: Hi-C from RPMI-7951 (ENCLB210AAY); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: not provided
STUDY_DESCRIPTOR_STUDY_ABSTRACT: Summary: We generated a genome-wide interaction map of regulatory elements in human cells (K562, GM12878) using Chromatin Interaction Analysis by Paired-End Tag sequencing (ChIA-PET) experiments targeting six broadly distributed factors.  For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf Overall Design: Chromatin interactions identified by ChIA-PET for 4 different histone modifications, RAD21 and RNAPII in K562 cell line, two biological replicates each.
SAMPLE_TITLE: ENCODE biosample ENCBS262AAA: Human Skin Malignant Melanoma Cells, This is a hyperdiploid human cell line with the modal chromosome number of 49, occurring in 24% of cells. Polyploid cells occurred at 22%, which is high.
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "age", "VALUE": "18 year"}, {"TAG": "donor ID", "VALUE": "ENCDO000ADL"}, {"TAG": "dev stage", "VALUE": "adult"}, {"TAG": "sample type", "VALUE": "immortalized cell line"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "cell line", "VALUE": "RPMI-7951"}, {"TAG": "health state", "VALUE": "malignant melanoma"}, {"TAG": "lab", "VALUE": "John Stamatoyannopoulos, UW"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS262AAA: Human Skin Malignant Melanoma Cells, This is a hyperdiploid human cell line with the modal chromosome number of 49, occurring in 24% of cells. Polyploid cells occurred at 22%, which is high.
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS262AAA: Human Skin Malignant Melanoma Cells, This is a hyperdiploid human cell line with the modal chromosome number of 49, occurring in 24% of cells. Polyploid cells occurred at 22%, which is high.
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