EXPERIMENT_TITLE: GSM7598124: intact Hi-C from esophagus squamous epithelium (ENCLB620HRD); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS360XJT
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS360XJT"}, {"TAG": "sample type", "VALUE": "tissue"}, {"TAG": "tissue", "VALUE": "esophagus squamous epithelium"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "dev_stage", "VALUE": "adult"}, {"TAG": "age", "VALUE": "53 year"}, {"TAG": "donor ID", "VALUE": "ENCDO793LXB"}, {"TAG": "lab", "VALUE": "Erez Aiden, Baylor"}, {"TAG": "source", "VALUE": "Kristin Ardlie"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS360XJT
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS360XJT
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419417.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos4/sra-pub-zq-3/SRR025/25419/SRR25419417/SRR25419417.lite.1", "size": "63049772135", "date": "2023-08-09 03:38:45", "md5": "31d75745a28909533162d9b113c93739", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419417", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419417/SRR25419417", "size": "133782729160", "date": "2023-08-03 21:52:12", "md5": "e8c81147961245470dcadd78bd73df73", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null], "@attributes": {"cluster": "public", "filename": "ENCFF517RNQ.fastq.gz", "url": "https://sra-pub-src-1.s3.amazonaws.com/SRR25419417/ENCFF517RNQ.fastq.gz.1", "size": "114775349565", "date": "2023-08-03 21:34:40", "md5": "f5028daf432227a373980084425ddabe", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]