EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02071
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02071
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02071"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Kinh in Ho Chi Minh City, Vietnam"}, {"TAG": "family id", "VALUE": "VN065"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02071
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02071
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02071-10a-1_S9_L001_R1_001.fastq.gz", "size": "15192326114", "date": "2024-09-10 04:05:37", "md5": "5a5948f5dd2198ef7dc905920954af97", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02071-10a-1_S9_L001_R2_001.fastq.gz", "size": "15225234739", "date": "2024-09-10 04:05:08", "md5": "62b1e9cab111ea8cb5c42792db128cdd", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613904", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613904/SRR30613904", "size": "20483482950", "date": "2024-09-10 04:08:07", "md5": "2e68433ff075e9b5ad3e5f8809ac3211", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613904.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613904/SRR30613904.lite.1", "size": "14455555318", "date": "2024-09-10 04:53:26", "md5": "0a308bcd79a04f1097734f424a753eae", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]