EXPERIMENT_TITLE: GSM7610364: intact Hi-C from IMR-90 (ENCLB931ZMF); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS785QWQ
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS785QWQ"}, {"TAG": "sample type", "VALUE": "cell line"}, {"TAG": "cell line", "VALUE": "IMR-90"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "health state", "VALUE": "unknown"}, {"TAG": "dev_stage", "VALUE": "embryonic"}, {"TAG": "age", "VALUE": "16 week"}, {"TAG": "donor ID", "VALUE": "ENCDO000AAX"}, {"TAG": "lab", "VALUE": "Mats Ljungman, UMichigan"}, {"TAG": "source", "VALUE": "ATCC"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS785QWQ
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS785QWQ
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF962XML.fastq.gz", "size": "196095064113", "date": "2023-08-08 13:47:45", "md5": "3b1ab64736e2d10c3b93730ba23b4470", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419526", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419526/SRR25419526", "size": "151369283055", "date": "2023-08-08 14:27:00", "md5": "4cd5f8936a55eaf9d23f6f3f6cd9b645", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419526.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos5/sra-pub-zq-11/SRR025/25419/SRR25419526/SRR25419526.lite.1", "size": "77863042994", "date": "2023-08-13 16:51:34", "md5": "26143df6f288ae4542ea92961b9fd450", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]