EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02074
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02074
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02074"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Kinh in Ho Chi Minh City, Vietnam"}, {"TAG": "family id", "VALUE": "VN066"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02074
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02074
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02074-08c-2_S16_L002_R1_001.fastq.gz", "size": "3625487142", "date": "2024-09-10 03:45:45", "md5": "4686762f471c1e316eb642d2575646d8", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02074-08c-2_S16_L002_R2_001.fastq.gz", "size": "3701013858", "date": "2024-09-10 03:45:26", "md5": "1453c4ac46e6764240ba0a9c74bf4edd", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613794", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613794/SRR30613794", "size": "4876166164", "date": "2024-09-10 03:46:47", "md5": "3175f740453d177bd21cf993b104898b", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613794.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613794/SRR30613794.lite.1", "size": "3412696064", "date": "2024-09-10 04:41:19", "md5": "26d8aa876b6ed02dbe78ad8cdac2dc86", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]