EXPERIMENT_TITLE: Illumina NovaSeq 6000 sequencing; Raw reads: HG03009
STUDY_DESCRIPTOR_STUDY_ABSTRACT: Identifying and cataloging the occurrence of structural variants (SVs)—including deletions, insertions,duplications, and inversions—in human chromosomes, comprehensive SV discovery in human chromosomes by combiningmultiple cutting-edge genome-analyzing technologies and computational tools to generate a novel SV referenceset encompassing ethnically diverse populations, which will serve as a valuable resource to clinicians andresearchers who investigate the causes of genetic diseases.
SAMPLE_TITLE: Coriell HG03009
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "Coriell panel", "VALUE": "MGP00022"}, {"TAG": "Super Population Code", "VALUE": "SAS"}, {"TAG": "family_id", "VALUE": "BD2"}, {"TAG": "local_family_id", "VALUE": "TG2"}, {"TAG": "Super Population Description", "VALUE": "South Asian"}, {"TAG": "population", "VALUE": "BEB"}, {"TAG": "type", "VALUE": "unrel"}, {"TAG": "DNA-ID", "VALUE": "HG03009"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "culture_collection", "VALUE": "Coriell:HG03009"}, {"TAG": "Population Description", "VALUE": "Bengali in Bangladesh"}]
Pool_Member_@attributes_sample_title: Coriell HG03009
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Coriell HG03009
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "ERR4501115.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos4/sra-pub-zq-1/ERR004/4501/ERR4501115/ERR4501115.lite.1", "size": "19420064309", "date": "2022-09-11 03:13:38", "md5": "ad3268652b843e9ba43fa8f0d49e43f8", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ERR4501115", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/ERR4501115/ERR4501115", "size": "26614810677", "date": "2020-09-18 11:40:12", "md5": "21171e51e0312d22d9dc77d7b2c5f6e9", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}]