EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG01099
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG01099
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG01099"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Puerto Rican in Puerto Rico"}, {"TAG": "family id", "VALUE": "PR31"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG01099
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG01099
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG01099-48d-1_S9_L004_R1_001.fastq.gz", "size": "22069889900", "date": "2024-09-10 04:43:49", "md5": "411add0cbb90169a87a4e68d97b26a2f", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG01099-48d-1_S9_L004_R2_001.fastq.gz", "size": "24580813766", "date": "2024-09-10 04:49:53", "md5": "74d8071b13aee1d082575e0123ecfa28", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613666", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613666/SRR30613666", "size": "31474163096", "date": "2024-09-10 05:01:25", "md5": "249a998524dfc7ae1b489d3a6fb79be6", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613666.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613666/SRR30613666.lite.1", "size": "21516396188", "date": "2024-09-10 06:29:32", "md5": "f0b514d22b7674ff0a7e0e57b94fa0f3", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]