EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02074
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02074
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02074"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Kinh in Ho Chi Minh City, Vietnam"}, {"TAG": "family id", "VALUE": "VN066"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02074
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02074
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02074-08c-1_S15_L001_R1_001.fastq.gz", "size": "3275546041", "date": "2024-09-10 03:41:33", "md5": "1684915a62ea27351c63fd9acc4a2232", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02074-08c-1_S15_L001_R2_001.fastq.gz", "size": "3360469675", "date": "2024-09-10 03:41:24", "md5": "62842a3ed67c2a035630201b33750372", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613800", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613800/SRR30613800", "size": "4408737982", "date": "2024-09-10 03:41:58", "md5": "65b22221ea55aebd61a0a4cbb59101e8", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613800.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613800/SRR30613800.lite.1", "size": "3075570230", "date": "2024-09-10 04:41:56", "md5": "14eef6c1155f696122ff68b314c69d84", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]