EXPERIMENT_TITLE: GSM7610483: intact Hi-C from left lung (ENCLB168JFX); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS196NEQ
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS196NEQ"}, {"TAG": "sample type", "VALUE": "tissue"}, {"TAG": "tissue", "VALUE": "left lung"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "health state", "VALUE": "DM: no; HTN: yes; CAD: no"}, {"TAG": "dev_stage", "VALUE": "adult"}, {"TAG": "age", "VALUE": "40 year"}, {"TAG": "donor ID", "VALUE": "ENCDO392CRK"}, {"TAG": "lab", "VALUE": "Michael Snyder, Stanford"}, {"TAG": "source", "VALUE": "Yiing Lin, MD, PhD"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS196NEQ
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS196NEQ
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF646JWP.fastq.gz", "size": "88310712338", "date": "2023-08-07 00:36:57", "md5": "e25344ae4a6cfabcb33788e259f5e8f9", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419582", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419582/SRR25419582", "size": "83880693022", "date": "2023-08-07 00:58:20", "md5": "7c66b69e1fc4e3cb1c17e2d99f4184d7", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419582.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos4/sra-pub-zq-5/SRR025/25419/SRR25419582/SRR25419582.lite.1", "size": "42676679271", "date": "2023-08-12 05:06:31", "md5": "e55f70d9f1a2f4e0cae398679e34b541", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]