EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of NA21093
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "NA21093"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "collection_date", "VALUE": "2023-02-07"}, {"TAG": "geo_loc_name", "VALUE": "USA"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "NA21093-2_FC1_S10_L002_R1_001.fastq.gz", "size": "11065406189", "date": "2024-06-26 07:45:48", "md5": "5c264df4de7a8d1e9812441bd1b6be2a", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "NA21093-2_FC2_S10_L002_R2_001.fastq.gz", "size": "11240099373", "date": "2024-06-26 07:48:07", "md5": "2d0a344ed67000aa4486e9481f4e96b4", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR29552894", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR29552894/SRR29552894", "size": "14979093903", "date": "2024-06-26 07:54:09", "md5": "2ce6ba5bf959018b5fec6ce0b6913940", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR29552894.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR029/29552/SRR29552894/SRR29552894.lite.1", "size": "9964763979", "date": "2024-06-26 08:17:43", "md5": "91b9dab594da78493496d50480733785", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]