EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02615
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02615
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02615"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Gambian in Western Division, The Gambia - Mandinka"}, {"TAG": "family id", "VALUE": "GB29"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02615
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02615
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02615-25b-2_S4_L002_R1_001.fastq.gz", "size": "9210314506", "date": "2024-09-10 03:52:33", "md5": "3abdb49739c8a45f15d08f363c7d46a3", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02615-25b-2_S4_L002_R2_001.fastq.gz", "size": "8269568545", "date": "2024-09-10 03:52:56", "md5": "e4215cb8ac3969d78b145f150141ecef", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613780", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613780/SRR30613780", "size": "11964161768", "date": "2024-09-10 03:54:10", "md5": "b088caf2e4f69f0dbf6b2e70ac86d5ad", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613780.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613780/SRR30613780.lite.1", "size": "8118839260", "date": "2024-09-10 04:41:17", "md5": "7098d39af43e03f3ddcefb6ca52d01ee", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]