EXPERIMENT_TITLE: HiC of homo sapiens: U251 DMSO
STUDY_DESCRIPTOR_STUDY_ABSTRACT: HiC, ChIP-seq, RNA-seq data of U251 glioma cells under DMSO and TMZ treatment respectively.
SAMPLE_TITLE: HiC_DMSO-3
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HiC"}, {"TAG": "age", "VALUE": "unkown"}, {"TAG": "biomaterial_provider", "VALUE": "Bohan Chen"}, {"TAG": "collection_date", "VALUE": "2023"}, {"TAG": "geo_loc_name", "VALUE": "China"}, {"TAG": "sex", "VALUE": "not collected"}, {"TAG": "tissue", "VALUE": "GBM"}, {"TAG": "cell_line", "VALUE": "U251"}, {"TAG": "treatment", "VALUE": "HiC_DMSO-3"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: HiC_DMSO-3
RUN_SET_RUN_Pool_Member_@attributes_sample_title: HiC_DMSO-3
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR27043147.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR027/27043/SRR27043147/SRR27043147.lite.1", "size": "3535624708", "date": "2023-12-04 16:35:20", "md5": "8176dbe12485b0db81f34d956309bfce", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR27043147", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR27043147/SRR27043147", "size": "4417470680", "date": "2023-12-04 14:16:38", "md5": "2f783fedcf1b9cacefffc6c5eca926d1", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "DMSO-3_2.fastq.gz", "size": "3341125732", "date": "2023-12-04 14:15:56", "md5": "6ec2d71f43584c17a652706fc3e69d2f", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "DMSO-3_1.fastq.gz", "size": "3206397303", "date": "2023-12-04 14:16:07", "md5": "1c608e8f600baa8f4f550c21d25714e6", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]