EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG04115
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG04115
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG04115"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Sri Lankan Tamil in the UK"}, {"TAG": "family id", "VALUE": "ST111"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG04115
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG04115
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG04115-13a-1_S13_L001_R1_001.fastq.gz", "size": "11222891784", "date": "2024-09-10 04:09:25", "md5": "1b8dc8d5c007e82408648545d89cb929", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG04115-13a-1_S13_L001_R2_001.fastq.gz", "size": "11178809042", "date": "2024-09-10 04:09:52", "md5": "f9c7cf3ad0b7aa564d40057cf733c74c", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613746", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613746/SRR30613746", "size": "15085801153", "date": "2024-09-10 04:22:29", "md5": "cb6514b611da7217be4497e72ef61178", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613746.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613746/SRR30613746.lite.1", "size": "10668091877", "date": "2024-09-10 04:56:50", "md5": "c774422a00bd37b4785cd9ef7102b612", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]