EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02976
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02976"}, {"TAG": "age", "VALUE": "No data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Esan in Nigeria"}, {"TAG": "family id", "VALUE": "NG24"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02976-1_S6_L004_R1_001.fastq.gz", "size": "7389097611", "date": "2024-08-14 21:19:59", "md5": "8e820b90e258451372de0df2bdc6d84b", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02976-1_S6_L004_R2_001.fastq.gz", "size": "7535727291", "date": "2024-08-14 21:22:06", "md5": "8740795de5638f70c8fbdd64e481bcbe", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30242379", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30242379/SRR30242379", "size": "10062490466", "date": "2024-08-14 21:24:38", "md5": "cc5334bf638addf3901c1b9a8b0105ed", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30242379.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30242/SRR30242379/SRR30242379.lite.1", "size": "6743903698", "date": "2024-08-14 22:47:32", "md5": "2a746a814ffe1e8bf5a2d1cf62dab753", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]