EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02391
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02391"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "NHGRI Sample Repository for Human Genetic Research at the Coriell Institute"}, {"TAG": "collection_date", "VALUE": "2022-05-10"}, {"TAG": "geo_loc_name", "VALUE": "China: XISHUANGBANNA"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "DAI CHINESE"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02391-1_S5_L003_R1_001.fastq.gz", "size": "6482087472", "date": "2024-08-14 21:11:46", "md5": "f8e8eb1714c26de26e6cf7e2f32f04af", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02391-1_S5_L003_R2_001.fastq.gz", "size": "6661499432", "date": "2024-08-14 21:13:51", "md5": "de384937e70fdbf1d6caa7d10f3c0f8a", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30242191", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30242191/SRR30242191", "size": "8867769241", "date": "2024-08-14 21:17:13", "md5": "ef86ec5d297471df8dcf6d3f2aa3a0f0", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30242191.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30242/SRR30242191/SRR30242191.lite.1", "size": "6128348593", "date": "2024-08-14 22:44:19", "md5": "f767a833ef0b71eb43accdccccf578a8", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]