EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02293
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02293
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02293"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Peruvian in Lima, Peru"}, {"TAG": "family id", "VALUE": "PEL51"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02293
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02293
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02293-54d-1_S7_L004_R1_001.fastq.gz", "size": "17639385971", "date": "2024-09-10 04:09:45", "md5": "64ebd3f11f6ed35a987b2468440c8261", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02293-54d-1_S7_L004_R2_001.fastq.gz", "size": "20137782711", "date": "2024-09-10 04:09:06", "md5": "ac4fe91826b2c02ab3b24f0855dc3bc7", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613703", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613703/SRR30613703", "size": "25544318319", "date": "2024-09-10 04:14:56", "md5": "2ea6a30100d284dd258d04b9bcaf3320", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613703.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613703/SRR30613703.lite.1", "size": "17191816323", "date": "2024-09-10 04:48:03", "md5": "16a8d0ac35e015d2feb9f8833f85ea7d", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]