EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG03710
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG03710
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG03710"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Punjabi in Lahore, Pakistan"}, {"TAG": "family id", "VALUE": "PK62"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG03710
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG03710
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG03710-17a-2_S4_L004_R1_001.fastq.gz", "size": "4934051187", "date": "2024-09-10 03:55:33", "md5": "6983856aa76e4c571367860bc0b3d56c", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG03710-17a-2_S4_L004_R2_001.fastq.gz", "size": "5229094745", "date": "2024-09-10 03:54:15", "md5": "aee268d8598c536735fd20cea911dbfc", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613764", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613764/SRR30613764", "size": "7224524339", "date": "2024-09-10 03:59:31", "md5": "56c5a5c42049740a344bdf1b022054cd", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613764.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613764/SRR30613764.lite.1", "size": "5136890475", "date": "2024-09-10 04:40:27", "md5": "40c6693109573a50e09dd3d7567322c0", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]