EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG00738
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG00738
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG00738"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Puerto Rican in Puerto Rico"}, {"TAG": "family id", "VALUE": "PR07"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG00738
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG00738
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG00738-27a-1_S5_L003_R1_001.fastq.gz", "size": "8149005986", "date": "2024-09-10 03:50:21", "md5": "1c62e4c34da9ea5f2c854d26f5b257fa", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG00738-27a-1_S5_L003_R2_001.fastq.gz", "size": "8383396400", "date": "2024-09-10 03:50:41", "md5": "a166f273ceec46f126ee4b553097c7f5", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613835", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613835/SRR30613835", "size": "11087189173", "date": "2024-09-10 03:52:16", "md5": "4b55932c12ca688bcb0eee6fe4803b12", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613835.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613835/SRR30613835.lite.1", "size": "7924138725", "date": "2024-09-10 04:43:10", "md5": "7553d2a7eed391e1e160d110e9be99bc", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]