EXPERIMENT_TITLE: GSM7656136: intact Hi-C from HCT116 (ENCLB195ADA); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS131GYJ
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS131GYJ"}, {"TAG": "sample type", "VALUE": "cell line"}, {"TAG": "cell line", "VALUE": "HCT116"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "health state", "VALUE": "colorectal carcinoma"}, {"TAG": "dev_stage", "VALUE": "adult"}, {"TAG": "age", "VALUE": "48 year"}, {"TAG": "donor ID", "VALUE": "ENCDO000ABE"}, {"TAG": "lab", "VALUE": "Erez Aiden, Baylor"}, {"TAG": "source", "VALUE": "Dr. Masato Kanemaki"}, {"TAG": "treatments", "VALUE": "treatment_term_name: 5-Phenyl-1H-indole-3-acetic acid; treatment_type: chemical; duration: 6; duration_units: hour;"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS131GYJ
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS131GYJ
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419817.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos2/sra-pub-zq-18/SRR025/25419/SRR25419817/SRR25419817.lite.1", "size": "44020023713", "date": "2023-08-16 09:08:30", "md5": "a7ea5f274fa881bb463cd7bff6f0154e", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419817", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419817/SRR25419817", "size": "94699349398", "date": "2023-08-11 08:06:46", "md5": "51363255b6a26ac8f952adb5052cfccc", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF885WFZ.fastq.gz", "size": "119543235975", "date": "2023-08-11 07:43:44", "md5": "6efdce93544f4bc682e4cd97ae3f0a5d", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]