EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG01884
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG01884
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG01884"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "African Caribbean in Barbados"}, {"TAG": "family id", "VALUE": "BB03"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG01884
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG01884
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613734.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613734/SRR30613734.lite.1", "size": "17909325268", "date": "2024-09-10 04:48:23", "md5": "fea68c7b75a9c00c38386cf406ddb5c2", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613734", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613734/SRR30613734", "size": "26738363140", "date": "2024-09-10 04:30:41", "md5": "79d7722c06d70f88413783bcdf5be4a9", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG01884-49d-2_S6_L004_R2_001.fastq.gz", "size": "21139273638", "date": "2024-09-10 04:28:12", "md5": "81555b1e9a9351306acbe20ff02bd73a", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG01884-49d-2_S6_L004_R1_001.fastq.gz", "size": "18347863396", "date": "2024-09-10 04:27:23", "md5": "c1c6c5de70ed5343ea5b9f397310eb00", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]