EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02602
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02602
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02602"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Punjabi in Lahore, Pakistan"}, {"TAG": "family id", "VALUE": "PK09"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02602
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02602
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02602-11a-2_S12_L004_R1_001.fastq.gz", "size": "19909762435", "date": "2024-09-10 04:12:43", "md5": "f8876b0b715e4e18fa8ce9e1b33b5c47", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02602-11a-2_S12_L004_R2_001.fastq.gz", "size": "19671618047", "date": "2024-09-10 04:13:30", "md5": "84db250881421fa06a98eaf38f490884", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613629", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613629/SRR30613629", "size": "26783129445", "date": "2024-09-10 04:17:52", "md5": "f67c466072f9dd408ab5334396943f68", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613629.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613629/SRR30613629.lite.1", "size": "18941519117", "date": "2024-09-10 04:50:33", "md5": "a6e51ef4bf6c7840ee71c82517b779e3", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]