EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02300
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02300
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02300"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Peruvian in Lima, Peru"}, {"TAG": "family id", "VALUE": "PEL52"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02300
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02300
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02300-42a-2_S22_L003_R1_001.fastq.gz", "size": "9353822528", "date": "2024-09-10 03:55:17", "md5": "57e5ca2754c9d9fa1cedbb552478a0fb", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02300-42a-2_S22_L003_R2_001.fastq.gz", "size": "9670447848", "date": "2024-09-10 03:56:00", "md5": "e434f709ad68311f3688b8dad48ce937", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613642", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613642/SRR30613642", "size": "12738229148", "date": "2024-09-10 04:00:57", "md5": "b4b9bdf0146686509f0429087f091f0a", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613642.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613642/SRR30613642.lite.1", "size": "9100908128", "date": "2024-09-10 04:41:38", "md5": "c8f8365b59e0e0b259e5acbf3a00f584", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]