EXPERIMENT_TITLE: GSM7656972: intact Hi-C from right lobe of liver (ENCLB631OIA); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS462BTB
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS462BTB"}, {"TAG": "sample type", "VALUE": "tissue"}, {"TAG": "tissue", "VALUE": "right lobe of liver"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "health state", "VALUE": "DM: no; HTN: yes; CAD: no"}, {"TAG": "dev_stage", "VALUE": "adult"}, {"TAG": "age", "VALUE": "47 year"}, {"TAG": "donor ID", "VALUE": "ENCDO912EIY"}, {"TAG": "lab", "VALUE": "Michael Snyder, Stanford"}, {"TAG": "source", "VALUE": "Yiing Lin, MD, PhD"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS462BTB
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS462BTB
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419940.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-zq-22/SRR025/25419/SRR25419940/SRR25419940.lite.1", "size": "71182060967", "date": "2023-08-17 07:52:43", "md5": "79ddb0c670cc1a87f2a0879580915e97", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419940", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419940/SRR25419940", "size": "143074821646", "date": "2023-08-12 06:43:58", "md5": "079df3651896005487e65ef548f0b4f5", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF442OZX.fastq.gz", "size": "173277971193", "date": "2023-08-12 05:55:39", "md5": "bdc964fbece9a055db87044a26f0c8ba", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]