EXPERIMENT_TITLE: GSM7657957: intact Hi-C from endothelial cell of umbilical vein (ENCLB862RLN); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS045DGX
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS045DGX"}, {"TAG": "sample type", "VALUE": "primary cell"}, {"TAG": "cell type", "VALUE": "endothelial cell of umbilical vein"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "dev_stage", "VALUE": "newborn"}, {"TAG": "donor ID", "VALUE": "ENCDO628LXZ"}, {"TAG": "lab", "VALUE": "Mats Ljungman, UMichigan"}, {"TAG": "source", "VALUE": "Lonza"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS045DGX
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS045DGX
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF288VXI.fastq.gz", "size": "139413969384", "date": "2023-08-12 11:52:27", "md5": "d1b19cb0457e562724f5a4d4cd0690f5", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419978", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419978/SRR25419978", "size": "107303440708", "date": "2023-08-12 12:31:44", "md5": "8d3acbd3df5ac95b2ad4227def2797a9", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419978.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-zq-22/SRR025/25419/SRR25419978/SRR25419978.lite.1", "size": "56551513559", "date": "2023-08-17 14:41:53", "md5": "0e8e76903ed22b82624fe69b3ae8dc25", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]