EXPERIMENT_TITLE: Reactivated_cHiC
STUDY_DESCRIPTOR_STUDY_ABSTRACT: Sequencing data for "From enhancers to genome conformation: complex transcriptional control underlies expression of a single herpesviral gene"
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "NA"}, {"TAG": "age", "VALUE": "NA"}, {"TAG": "biomaterial_provider", "VALUE": "NA"}, {"TAG": "collection_date", "VALUE": "NA"}, {"TAG": "geo_loc_name", "VALUE": "NA"}, {"TAG": "sex", "VALUE": "NA"}, {"TAG": "tissue", "VALUE": "NA"}, {"TAG": "cell_line", "VALUE": "ISLK-BAC16"}, {"TAG": "treatment", "VALUE": "Reactivated_cHiC"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "Reactivated_cHiC_R1.fastq.gz", "size": "5295789424", "date": "2024-08-23 14:47:21", "md5": "bf7ab6562f6ae1e2a02c0ea38931c42b", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "Reactivated_cHiC_R2.fastq.gz", "size": "5356555495", "date": "2024-08-23 14:47:32", "md5": "9749b9d2844a8f87a37842626dbc7fe4", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30357187", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30357187/SRR30357187", "size": "6699077489", "date": "2024-08-23 14:48:14", "md5": "08cb7e71d3e5624ec0efeab409ad7b88", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30357187.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30357/SRR30357187/SRR30357187.lite.1", "size": "5276300461", "date": "2024-08-23 17:29:49", "md5": "3f47b6c05c2a714840c1ec0948c306d5", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]