EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02391
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02391"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "NHGRI Sample Repository for Human Genetic Research at the Coriell Institute"}, {"TAG": "collection_date", "VALUE": "2022-05-10"}, {"TAG": "geo_loc_name", "VALUE": "China: XISHUANGBANNA"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "DAI CHINESE"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02391-1_S5_L002_R1_001.fastq.gz", "size": "6484603761", "date": "2024-08-14 21:10:14", "md5": "de225219252d390c6a60df65eb46f872", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02391-1_S5_L002_R2_001.fastq.gz", "size": "6680903789", "date": "2024-08-14 21:10:34", "md5": "e4e518c7368cab539d575a8ff990a97c", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30242457", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30242457/SRR30242457", "size": "8883994732", "date": "2024-08-14 21:11:38", "md5": "9f4029aa30674b39c980637947c1bfbc", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30242457.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30242/SRR30242457/SRR30242457.lite.1", "size": "6129644144", "date": "2024-08-14 22:49:57", "md5": "32cd6763f7dcf72ba721ed89c3f6c1e5", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]