EXPERIMENT_TITLE: GSM6043925: donor_2.HiC; Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: none provided by the submitter
STUDY_DESCRIPTOR_STUDY_ABSTRACT: 3D chromatin structure of endometrial organoids and PRKO and Sox17cKO mouse uterus Overall design: HiC of endometrial orgaoids treated with estrogen and progesterone and ovariectomized uterus from progesterone receptor-null (PRKO) and PR-CrexSox17-flox mice 1 hour after treatment with V or progesterone
SAMPLE_TITLE: donor_2.HiC
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "source_name", "VALUE": "uterine epithelial cells"}, {"TAG": "treatment", "VALUE": "E2+MPA"}, {"TAG": "tissue", "VALUE": "uterine epithelial cells"}]
Pool_Member_@attributes_sample_title: donor_2.HiC
RUN_SET_RUN_Pool_Member_@attributes_sample_title: donor_2.HiC
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR18753548.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-zq-24/SRR018/18753/SRR18753548/SRR18753548.lite.1", "size": "27583138597", "date": "2022-08-27 05:01:34", "md5": "e347925fd806099d307a427e3bd1fa0e", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR18753548", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR18753548/SRR18753548", "size": "33856913477", "date": "2022-04-15 12:59:47", "md5": "4e37cee2f64db1fcc9d278fbafb44f46", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "NOVA0237.2-509-Hi-C_20210325_100502.L001.2.fastq.gz", "size": "32738181361", "date": "2022-04-15 12:40:42", "md5": "a338230557cc9085721d72332cd04833", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "NOVA0237.2-509-Hi-C_20210325_100502.L001.1.fastq.gz", "size": "32097184884", "date": "2022-04-15 12:32:38", "md5": "e0d34f7c05b3f46ba89f6833b90950e3", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]