EXPERIMENT_TITLE: GSM7611928: intact Hi-C from CD14-positive monocyte (ENCLB092SBI); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS451PTV
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS451PTV"}, {"TAG": "sample type", "VALUE": "primary cell"}, {"TAG": "cell type", "VALUE": "CD14-positive monocyte"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "dev_stage", "VALUE": "adult"}, {"TAG": "age", "VALUE": "30 year"}, {"TAG": "donor ID", "VALUE": "ENCDO544CHQ"}, {"TAG": "lab", "VALUE": "Yijun Ruan, JAX"}, {"TAG": "source", "VALUE": "AllCells"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS451PTV
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS451PTV
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF635RIN.fastq.gz", "size": "109832859087", "date": "2023-08-06 15:04:19", "md5": "f5ae72fdcf2c97b8aa52762488f28c85", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419639", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419639/SRR25419639", "size": "106498016101", "date": "2023-08-06 15:44:44", "md5": "29f62f15e43b71256fb9c0202145e784", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419639.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos4/sra-pub-zq-7/SRR025/25419/SRR25419639/SRR25419639.lite.1", "size": "58067604424", "date": "2023-08-11 18:01:20", "md5": "9392b8d78c9ea2032f03117c09d0885b", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]