EXPERIMENT_TITLE: GSM7657966: intact Hi-C from HCT116 (ENCLB059CBC); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS455QGB
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS455QGB"}, {"TAG": "sample type", "VALUE": "cell line"}, {"TAG": "cell line", "VALUE": "HCT116"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "health state", "VALUE": "colorectal carcinoma"}, {"TAG": "dev_stage", "VALUE": "adult"}, {"TAG": "age", "VALUE": "48 year"}, {"TAG": "donor ID", "VALUE": "ENCDO000ABE"}, {"TAG": "lab", "VALUE": "Erez Aiden, Baylor"}, {"TAG": "source", "VALUE": "Dr. Masato Kanemaki"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS455QGB
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS455QGB
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419989.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos2/sra-pub-zq-20/SRR025/25419/SRR25419989/SRR25419989.lite.1", "size": "18563578952", "date": "2023-08-14 14:38:43", "md5": "e12304c154bcb1579b79fe6bfbaa7acb", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419989", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419989/SRR25419989", "size": "39872322721", "date": "2023-08-09 12:55:16", "md5": "9a0b61a4cac1cd4fddea1fc0648be378", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF327SJC.fastq.gz", "size": "33151782749", "date": "2023-08-09 12:33:53", "md5": "57af1799bd5f45f5c1bea239166a5436", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]