EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG00423
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG00423
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG00423"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Han Chinese South"}, {"TAG": "family id", "VALUE": "SH007"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG00423
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG00423
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG00423-81d-1_S15_L003_R1_001.fastq.gz", "size": "9715405554", "date": "2024-09-10 04:09:32", "md5": "f07f580fcf6bdd69b592b3a6ba9bfdb8", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG00423-81d-1_S15_L003_R2_001.fastq.gz", "size": "9957574408", "date": "2024-09-10 04:12:36", "md5": "be81590562db948a75a59d1f6f4f700c", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613888", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613888/SRR30613888", "size": "13133021494", "date": "2024-09-10 04:22:28", "md5": "b6890c4652683e32ad73fdea8785693b", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613888.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613888/SRR30613888.lite.1", "size": "9473245942", "date": "2024-09-10 04:44:37", "md5": "cf8329ec54ea2ec4f7e74fbf0054e0da", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]