EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02809
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02809
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02809"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Gambian in Western Division, The Gambia - Mandinka"}, {"TAG": "family id", "VALUE": "GB63"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02809
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02809
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613761.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613761/SRR30613761.lite.1", "size": "21965301254", "date": "2024-09-10 06:25:40", "md5": "598e5df97ae95e3d6ee0891110b0333d", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613761", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613761/SRR30613761", "size": "32909011366", "date": "2024-09-10 05:30:13", "md5": "6c12da77292b7613a4b6b0725c885b2c", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02809-52d-1_S3_L003_R2_001.fastq.gz", "size": "26206570640", "date": "2024-09-10 05:09:20", "md5": "2b1cecb1f60fb361707221b2e4a7c1b3", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02809-52d-1_S3_L003_R1_001.fastq.gz", "size": "22139747105", "date": "2024-09-10 05:03:04", "md5": "e42d34fe4c535da3006fbd7c1d29e15e", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]