EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02683
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02683
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02683"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Punjabi in Lahore, Pakistan"}, {"TAG": "family id", "VALUE": "PK16"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02683
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02683
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02683-44a-2_S16_L001_R1_001.fastq.gz", "size": "8863052044", "date": "2024-09-10 03:53:35", "md5": "67d685be46748d8bbb4bde6ce8d5fac2", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02683-44a-2_S16_L001_R2_001.fastq.gz", "size": "9390570103", "date": "2024-09-10 03:53:58", "md5": "66641ebcc64b3e3466b2f3c89b0dfc40", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613630", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613630/SRR30613630", "size": "12137542107", "date": "2024-09-10 03:57:26", "md5": "b819116deed357851263ec8a55cb8caa", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613630.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613630/SRR30613630.lite.1", "size": "8728532223", "date": "2024-09-10 04:41:20", "md5": "7a837c39eb5bb5c27a95e1af20478802", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]