EXPERIMENT_TITLE: HiC of homo sapiens: U251 DMSO
STUDY_DESCRIPTOR_STUDY_ABSTRACT: HiC, ChIP-seq, RNA-seq data of U251 glioma cells under DMSO and TMZ treatment respectively.
SAMPLE_TITLE: HiC_DMSO-4
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HiC"}, {"TAG": "age", "VALUE": "unkown"}, {"TAG": "biomaterial_provider", "VALUE": "Bohan Chen"}, {"TAG": "collection_date", "VALUE": "2023"}, {"TAG": "geo_loc_name", "VALUE": "China"}, {"TAG": "sex", "VALUE": "not collected"}, {"TAG": "tissue", "VALUE": "GBM"}, {"TAG": "cell_line", "VALUE": "U251"}, {"TAG": "treatment", "VALUE": "HiC_DMSO-4"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: HiC_DMSO-4
RUN_SET_RUN_Pool_Member_@attributes_sample_title: HiC_DMSO-4
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "220623HiC_DMSO_1.clean.fq.gz", "size": "478240388", "date": "2023-12-04 14:09:32", "md5": "6aa0ee5715a6b972ce475f67e042e17f", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "220623HiC_DMSO_2.clean.fq.gz", "size": "499649201", "date": "2023-12-04 14:09:39", "md5": "86ee14c4f955948ff7594f42a8e26fd0", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR27043136", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR27043136/SRR27043136", "size": "692570738", "date": "2023-12-04 14:09:59", "md5": "624019fbaa42b9da26a96303c9bad3f8", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR27043136.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR027/27043/SRR27043136/SRR27043136.lite.1", "size": "528748646", "date": "2023-12-04 16:34:18", "md5": "3d00cf37baf56cf8f3d64d7e6cea2919", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]