EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG01884
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG01884
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG01884"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "African Caribbean in Barbados"}, {"TAG": "family id", "VALUE": "BB03"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG01884
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG01884
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG01884-49d-2_S6_L001_R1_001.fastq.gz", "size": "19533372525", "date": "2024-09-10 04:13:22", "md5": "24491cb3efa2017e7f3dcb8a858ad020", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG01884-49d-2_S6_L001_R2_001.fastq.gz", "size": "22715828193", "date": "2024-09-10 04:14:19", "md5": "5efc852e3b3ee1c8934cee02551a0c1d", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613653", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613653/SRR30613653", "size": "28529347962", "date": "2024-09-10 04:19:39", "md5": "ad58cd210f6c93b843284e4a133f55c2", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613653.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613653/SRR30613653.lite.1", "size": "19394169654", "date": "2024-09-10 04:51:19", "md5": "203591453bacbcf82dc8c1cda796e633", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]