EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02135
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02135
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02135"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Kinh in Ho Chi Minh City, Vietnam"}, {"TAG": "family id", "VALUE": "VN081"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02135
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02135
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02135-09a-2_S8_L002_R1_001.fastq.gz", "size": "11934198778", "date": "2024-09-10 04:17:43", "md5": "c038efb62462a57236888e66579a6f38", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02135-09a-2_S8_L002_R2_001.fastq.gz", "size": "11678393583", "date": "2024-09-10 04:18:22", "md5": "011fb35ad91dc80a5eec81b2dfc2fb3b", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613716", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613716/SRR30613716", "size": "15933336943", "date": "2024-09-10 04:24:04", "md5": "a3f7bb5aa7f16bdac361b8d162287c9d", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613716.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613716/SRR30613716.lite.1", "size": "11296236843", "date": "2024-09-10 04:41:39", "md5": "0a12c130008c8754f23bf04480b3b011", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]