EXPERIMENT_TITLE: GSM7656195: intact Hi-C from HepG2 (ENCLB740OBC); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS285MXI
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS285MXI"}, {"TAG": "sample type", "VALUE": "cell line"}, {"TAG": "cell line", "VALUE": "HepG2"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "health state", "VALUE": "hepatocellular carcinoma"}, {"TAG": "dev_stage", "VALUE": "child"}, {"TAG": "age", "VALUE": "15 year"}, {"TAG": "donor ID", "VALUE": "ENCDO000AAC"}, {"TAG": "lab", "VALUE": "Mats Ljungman, UMichigan"}, {"TAG": "source", "VALUE": "ATCC"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS285MXI
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS285MXI
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419893.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos4/sra-pub-zq-5/SRR025/25419/SRR25419893/SRR25419893.lite.1", "size": "82521404139", "date": "2023-08-19 06:25:01", "md5": "f73f7d3392ba8531bce21143bc100996", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419893", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419893/SRR25419893", "size": "163996158528", "date": "2023-08-14 02:43:01", "md5": "a17a7619fbe8f0cb55285c44b780a2ab", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF146AKC.fastq.gz", "size": "212381534316", "date": "2023-08-14 01:40:40", "md5": "f7da05ff07fe4a34cc44d67881d304ba", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]