EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG00126
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG00126"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "collection_date", "VALUE": "2023-04-18"}, {"TAG": "geo_loc_name", "VALUE": "United Kingdom"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG00126-2_FC2_S4_L004_R1_001.fastq.gz", "size": "17720350182", "date": "2024-08-22 00:53:04", "md5": "d60cbb32786b6e5db29eb4faaef980f3", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG00126-2_FC2_S4_L004_R2_001.fastq.gz", "size": "17970160916", "date": "2024-08-22 00:57:40", "md5": "cd4cf5137a7b2bc20917fa9a815d5fb9", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30310952", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30310952/SRR30310952", "size": "24262263995", "date": "2024-08-22 01:18:18", "md5": "397e521f36628d9fb87ee916514190a2", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30310952.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30310/SRR30310952/SRR30310952.lite.1", "size": "15824558359", "date": "2024-08-22 03:08:24", "md5": "3b8fe63563c5e9411c1750f1d0accccc", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]