EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG03669
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG03669
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG03669"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Punjabi in Lahore, Pakistan"}, {"TAG": "family id", "VALUE": "PK58"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG03669
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG03669
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG03669-26a-2_S4_L003_R1_001.fastq.gz", "size": "6729295178", "date": "2024-09-10 03:54:52", "md5": "bdb676319e25d3197ba642c68de31486", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG03669-26a-2_S4_L003_R2_001.fastq.gz", "size": "6766548956", "date": "2024-09-10 03:54:21", "md5": "cb50fb171c3e944a7e485b7f8472943e", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613617", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613617/SRR30613617", "size": "9085070885", "date": "2024-09-10 03:57:24", "md5": "c58bab4b5d1cf5bc4504010ce4a913c8", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613617.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613617/SRR30613617.lite.1", "size": "6587380929", "date": "2024-09-10 04:41:07", "md5": "9282010881ff400b662a3c39f594225e", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]