EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02300
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02300
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02300"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Peruvian in Lima, Peru"}, {"TAG": "family id", "VALUE": "PEL52"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02300
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02300
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02300-42a-1_S21_L004_R1_001.fastq.gz", "size": "7717134556", "date": "2024-09-10 03:50:21", "md5": "cca5c2148ffbb38c448a486d55bd1795", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02300-42a-1_S21_L004_R2_001.fastq.gz", "size": "8123004319", "date": "2024-09-10 03:50:46", "md5": "57c6e13371e0d5bdb0ba8496f448334f", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613639", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613639/SRR30613639", "size": "10543515746", "date": "2024-09-10 03:53:42", "md5": "d5665ee13a08cd0ae39888f964da4a48", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613639.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613639/SRR30613639.lite.1", "size": "7610405986", "date": "2024-09-10 04:41:56", "md5": "8ab04e4c73447f4db689f83a222cda3e", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]