EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02738
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02738
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02738"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Punjabi in Lahore, Pakistan"}, {"TAG": "family id", "VALUE": "PK27"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02738
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02738
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02738-40a-2_S18_L004_R1_001.fastq.gz", "size": "10165978780", "date": "2024-09-10 04:13:03", "md5": "59fb72239d77c452a386a57a48f5a8ed", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02738-40a-2_S18_L004_R2_001.fastq.gz", "size": "10675378600", "date": "2024-09-10 04:17:36", "md5": "62c7a35588d3ac307a9628eb1cf2e49d", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613765", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613765/SRR30613765", "size": "13859781390", "date": "2024-09-10 04:35:45", "md5": "30857dbe3d42020d9cc5fcc1893e3e4b", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613765.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613765/SRR30613765.lite.1", "size": "10023093458", "date": "2024-09-10 06:24:31", "md5": "3e1b080ac362f0de590d0d0f323c4e89", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]