EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG01346
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG01346
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG01346"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Colombian in Medellin, Colombia"}, {"TAG": "family id", "VALUE": "CLM27"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG01346
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG01346
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG01346-35a-1_S13_L003_R1_001.fastq.gz", "size": "9563515456", "date": "2024-09-10 03:55:56", "md5": "eb65baff1044951e3074e40c0f910b1f", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG01346-35a-1_S13_L003_R2_001.fastq.gz", "size": "9021065349", "date": "2024-09-10 03:56:16", "md5": "bb74925b0173cd6c4d6bfaedbc55f338", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613828", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613828/SRR30613828", "size": "12610141974", "date": "2024-09-10 04:00:49", "md5": "3ba80c44476f064df60a16f9a76b427c", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613828.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613828/SRR30613828.lite.1", "size": "8339850998", "date": "2024-09-10 04:43:03", "md5": "05841e61bec0df29bcc1813716d253fc", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]