EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG04115
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG04115
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG04115"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Sri Lankan Tamil in the UK"}, {"TAG": "family id", "VALUE": "ST111"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG04115
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG04115
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG04115-13a-1_S13_L002_R1_001.fastq.gz", "size": "11108589450", "date": "2024-09-10 03:58:29", "md5": "3d79cb7eaa30b93aba62c9c770ca1581", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG04115-13a-1_S13_L002_R2_001.fastq.gz", "size": "11049274150", "date": "2024-09-10 03:58:49", "md5": "61028da7344b2acb415290890ebbda74", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613745", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613745/SRR30613745", "size": "14920256106", "date": "2024-09-10 04:04:15", "md5": "1d9536d31f036c68ce8d3fc89b2de7d2", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613745.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613745/SRR30613745.lite.1", "size": "10531715546", "date": "2024-09-10 04:44:52", "md5": "a52feafcb0fea8f522bbd3bdfd5e4138", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]