EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG01099
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG01099
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG01099"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Puerto Rican in Puerto Rico"}, {"TAG": "family id", "VALUE": "PR31"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG01099
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG01099
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG01099-48d-2_S10_L001_R1_001.fastq.gz", "size": "18129417764", "date": "2024-09-10 04:29:44", "md5": "7868f72845eb8d0bd30086dddea3a2a7", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG01099-48d-2_S10_L001_R2_001.fastq.gz", "size": "21119361147", "date": "2024-09-10 04:30:50", "md5": "a598087aedaf3e6f255165dedf874c95", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613665", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613665/SRR30613665", "size": "26637009270", "date": "2024-09-10 04:41:14", "md5": "aadd1a034c0b70ddeb62e2d8bf9382a9", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613665.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613665/SRR30613665.lite.1", "size": "17656112838", "date": "2024-09-10 06:24:54", "md5": "306ff228e6df1ac49a9c0a804b71f9dc", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]