EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG02738
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG02738
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG02738"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Punjabi in Lahore, Pakistan"}, {"TAG": "family id", "VALUE": "PK27"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG02738
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG02738
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02738-40a-2_S18_L003_R1_001.fastq.gz", "size": "8605751655", "date": "2024-09-10 04:04:03", "md5": "3b58982b9960c819bbd52292cb612c75", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG02738-40a-2_S18_L003_R2_001.fastq.gz", "size": "8986633870", "date": "2024-09-10 04:03:45", "md5": "275cb62c2acbc450b9f950d53bbe986c", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613766", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613766/SRR30613766", "size": "11757439205", "date": "2024-09-10 04:05:53", "md5": "f89fab2f2782797b1e7689d289edaec8", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613766.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613766/SRR30613766.lite.1", "size": "8357415981", "date": "2024-09-10 04:41:51", "md5": "f65fecb888cf937ef62dfcf51f9ddf48", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]