EXPERIMENT_TITLE: GSM7610368: intact Hi-C from mucosa of descending colon (ENCLB010FFQ); Homo sapiens; Hi-C
EXPERIMENT_DESIGN_LIBRARY_DESCRIPTOR_LIBRARY_CONSTRUCTION_PROTOC: general protocol: https://www.encodeproject.org/documents/4dfd0b02-ed3a-4461-b0f5-9ef51570af1f/@@download/attachment/intacthi-c_modularprotocol-release.pdf
SAMPLE_TITLE: ENCODE biosample ENCBS915BJX
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "ENCODE accession", "VALUE": "ENCBS915BJX"}, {"TAG": "sample type", "VALUE": "tissue"}, {"TAG": "tissue", "VALUE": "mucosa of descending colon"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "health state", "VALUE": "DM: no; HTN: no; CAD: no; lungs with moderate emphysema"}, {"TAG": "dev_stage", "VALUE": "adult"}, {"TAG": "age", "VALUE": "61 year"}, {"TAG": "donor ID", "VALUE": "ENCDO186XRB"}, {"TAG": "lab", "VALUE": "Michael Snyder, Stanford"}, {"TAG": "source", "VALUE": "Yiing Lin, MD, PhD"}]
Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS915BJX
RUN_SET_RUN_Pool_Member_@attributes_sample_title: ENCODE biosample ENCBS915BJX
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR25419530.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos4/sra-pub-zq-5/SRR025/25419/SRR25419530/SRR25419530.lite.1", "size": "91157747852", "date": "2023-08-12 12:57:31", "md5": "93019f24b0eab45b6301f32586fc47d6", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR25419530", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR25419530/SRR25419530", "size": "174762229072", "date": "2023-08-07 09:09:18", "md5": "9056072a4de1434ab55235ca72b51d84", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "ENCFF984WUM.fastq.gz", "size": "214641627075", "date": "2023-08-07 08:08:20", "md5": "35e5737cf4eb44d497ba3c122689b887", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}]