EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of HG03669
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_TITLE: Human sample HG03669
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "HG03669"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "sex", "VALUE": "female"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "population", "VALUE": "Punjabi in Lahore, Pakistan"}, {"TAG": "family id", "VALUE": "PK58"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
Pool_Member_@attributes_sample_title: Human sample HG03669
RUN_SET_RUN_Pool_Member_@attributes_sample_title: Human sample HG03669
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG03669-26a-1_S3_L004_R1_001.fastq.gz", "size": "10196478303", "date": "2024-09-10 04:04:53", "md5": "140c2811f064b7084769c5b2e712a313", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "HG03669-26a-1_S3_L004_R2_001.fastq.gz", "size": "10444826888", "date": "2024-09-10 04:05:31", "md5": "0443edcabda787b1a400fa60dab01731", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR30613620", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR30613620/SRR30613620", "size": "13813984441", "date": "2024-09-10 04:16:03", "md5": "8000c9b68cf4ac4cb4c97f15c3c0b5c5", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR30613620.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR030/30613/SRR30613620/SRR30613620.lite.1", "size": "10126460257", "date": "2024-09-10 04:40:19", "md5": "071c3a91997b6c1f2d3d83359b330149", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]