EXPERIMENT_TITLE: Illumina Sequencing of Omni-C Libraries of NA18608
STUDY_DESCRIPTOR_STUDY_ABSTRACT: This project contains genomic sequencing data generated for the Human Pangenome Reference Consortium (HPRC). Data types include, but are not limited to: PacBio HiFi, Oxford Nanopore, Hi-C/Omni-C. Data are used for assembly of genomes and pangenomes as well as assembly analysis and quality control.The Human Pangenome Reference Consortium aims to create a collection of high-quality reference genomes that represent the genetic diversity of the human population.
SAMPLE_SAMPLE_ATTRIBUTES_SAMPLE_ATTRIBUTE: [{"TAG": "isolate", "VALUE": "NA18608"}, {"TAG": "age", "VALUE": "No Data"}, {"TAG": "biomaterial_provider", "VALUE": "Coriell Institute"}, {"TAG": "collection_date", "VALUE": "2022-10-11"}, {"TAG": "geo_loc_name", "VALUE": "China"}, {"TAG": "sex", "VALUE": "male"}, {"TAG": "tissue", "VALUE": "B-Lymphocyte"}, {"TAG": "BioSampleModel", "VALUE": "Human"}]
RUN_SET_RUN_SRAFiles_SRAFile: [{"Alternatives": null, "@attributes": {"cluster": "public", "filename": "NA18608-1_FC1_S11_L001_R1_001.fastq.gz", "size": "7050048195", "date": "2024-06-26 07:38:02", "md5": "30a3b1bef8273c5c3aba8a441e39db55", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "NA18608-1_FC2_S11_L001_R2_001.fastq.gz", "size": "7158701806", "date": "2024-06-26 07:39:07", "md5": "98cd48afe84b3ebead2f30d089ceeba4", "version": "1", "semantic_name": "fastq", "supertype": "Original", "sratoolkit": "0"}}, {"Alternatives": null, "@attributes": {"cluster": "public", "filename": "SRR29552820", "url": "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR29552820/SRR29552820", "size": "9555548896", "date": "2024-06-26 07:43:11", "md5": "1a6102c6fca982f75b4b6d508263a5fd", "version": "1", "semantic_name": "SRA Normalized", "supertype": "Primary ETL", "sratoolkit": "1"}}, {"Alternatives": [null, null, null], "@attributes": {"cluster": "public", "filename": "SRR29552820.lite", "url": "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos6/sra-pub-zq-40/SRR029/29552/SRR29552820/SRR29552820.lite.1", "size": "6279814664", "date": "2024-06-26 08:16:19", "md5": "f929ee2f8cfda68e5faccec421298b49", "version": "1", "semantic_name": "SRA Lite", "supertype": "Primary ETL", "sratoolkit": "1"}}]