FastQCFastQC Report
Tue 27 Feb 2024
day02_mesoderm_rep2.lane8.0.1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filenameday02_mesoderm_rep2.lane8.0.1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences134851656
Sequences flagged as poor quality0
Sequence length35-101
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)