#==================================================
#All numbers are READ count
#==================================================

Total records:                          181107831

QC failed:                              0
Optical/PCR duplicate:                  48065650
Non primary hits                        14991510
Unmapped reads:                         0
mapq < mapq_cut (non-unique):           3196454

mapq >= mapq_cut (unique):              114854217
Read-1:                                 57430137
Read-2:                                 57424080
Reads map to '+':                       57427207
Reads map to '-':                       57427010
Non-splice reads:                       87694222
Splice reads:                           27159995
Reads mapped in proper pairs:           114818890
Proper-paired reads map to different chrom:0