Index of /reimonnt/DE-to-HB/JHG_RNA-seq/multiqc/star_salmon/multiqc_report_data/
../
BETA-multiqc.parquet 18-Aug-2025 19:10 8009235
cutadapt_filtered_reads_plot.txt 18-Aug-2025 19:10 351
cutadapt_trimmed_sequences_plot_3_Counts.txt 18-Aug-2025 19:10 31229
cutadapt_trimmed_sequences_plot_3_Obs_Exp.txt 18-Aug-2025 19:10 59004
fastqc_raw-status-check-heatmap.txt 18-Aug-2025 19:10 1084
fastqc_raw_adapter_content_plot.txt 18-Aug-2025 19:10 103848
fastqc_raw_overrepresented_sequences_plot.txt 18-Aug-2025 19:10 885
fastqc_raw_per_base_n_content_plot.txt 18-Aug-2025 19:10 18416
fastqc_raw_per_base_sequence_quality_plot.txt 18-Aug-2025 19:10 16860
fastqc_raw_per_sequence_gc_content_plot_Counts.txt 18-Aug-2025 19:10 30366
fastqc_raw_per_sequence_gc_content_plot_Percent..> 18-Aug-2025 19:10 50728
fastqc_raw_per_sequence_quality_scores_plot.txt 18-Aug-2025 19:10 11049
fastqc_raw_sequence_counts_plot.txt 18-Aug-2025 19:10 556
fastqc_raw_sequence_duplication_levels_plot.txt 18-Aug-2025 19:10 7847
fastqc_raw_top_overrepresented_sequences_table.txt 18-Aug-2025 19:10 1635
fastqc_sequence_length_distribution_plot.txt 18-Aug-2025 19:10 7813
fastqc_trimmed-status-check-heatmap.txt 18-Aug-2025 19:10 1049
fastqc_trimmed_adapter_content_plot.txt 18-Aug-2025 19:10 59416
fastqc_trimmed_overrepresented_sequences_plot.txt 18-Aug-2025 19:10 895
fastqc_trimmed_per_base_n_content_plot.txt 18-Aug-2025 19:10 16605
fastqc_trimmed_per_base_sequence_quality_plot.txt 18-Aug-2025 19:10 16851
fastqc_trimmed_per_sequence_gc_content_plot_Cou..> 18-Aug-2025 19:10 30516
fastqc_trimmed_per_sequence_gc_content_plot_Per..> 18-Aug-2025 19:10 50694
fastqc_trimmed_per_sequence_quality_scores_plot..> 18-Aug-2025 19:10 8510
fastqc_trimmed_sequence_counts_plot.txt 18-Aug-2025 19:10 556
fastqc_trimmed_sequence_duplication_levels_plot..> 18-Aug-2025 19:10 7849
fastqc_trimmed_top_overrepresented_sequences_ta..> 18-Aug-2025 19:10 1655
junction_saturation_known.txt 18-Aug-2025 19:10 1771
junction_saturation_novel.txt 18-Aug-2025 19:10 1705
multiqc.log 18-Aug-2025 19:10 58158
multiqc_citations.txt 18-Aug-2025 19:10 427
multiqc_cutadapt.txt 18-Aug-2025 19:10 1732
multiqc_data.json 18-Aug-2025 19:10 9487706
multiqc_dupradar.txt 18-Aug-2025 19:10 790538
multiqc_fail_strand_check_table.txt 18-Aug-2025 19:10 1521
multiqc_fastqc_fastqc_raw.txt 18-Aug-2025 19:10 4026
multiqc_fastqc_fastqc_trimmed.txt 18-Aug-2025 19:10 4252
multiqc_general_stats.txt 18-Aug-2025 19:10 7890
multiqc_picard_dups.txt 18-Aug-2025 19:10 1152
multiqc_rseqc_bam_stat.txt 18-Aug-2025 19:10 1742
multiqc_rseqc_infer_experiment.txt 18-Aug-2025 19:10 268
multiqc_rseqc_junction_annotation.txt 18-Aug-2025 19:10 1957
multiqc_rseqc_read_distribution.txt 18-Aug-2025 19:10 4742
multiqc_sample-relationships.txt 18-Aug-2025 19:10 1234
multiqc_sample-relationships_1.txt 18-Aug-2025 19:10 415
multiqc_samtools_flagstat.txt 18-Aug-2025 19:10 2261
multiqc_samtools_idxstats.txt 18-Aug-2025 19:10 25601
multiqc_samtools_stats.txt 18-Aug-2025 19:10 4987
multiqc_software_versions.txt 18-Aug-2025 19:10 1986
multiqc_sources.txt 18-Aug-2025 19:10 28566
multiqc_star.txt 18-Aug-2025 19:10 2365
picard_MarkIlluminaAdapters_histogram.txt 18-Aug-2025 19:10 0
picard_MeanQualityByCycle_histogram.txt 18-Aug-2025 19:10 0
picard_QualityScoreDistribution_histogram.txt 18-Aug-2025 19:10 0
picard_deduplication.txt 18-Aug-2025 19:10 589
qualimap_gene_coverage_profile_Counts.txt 18-Aug-2025 19:10 22407
qualimap_gene_coverage_profile_Normalised.txt 18-Aug-2025 19:10 22599
qualimap_genomic_origin.txt 18-Aug-2025 19:10 375
qualimap_rnaseq_cov_hist.txt 18-Aug-2025 19:10 17097
qualimap_rnaseq_genome_results.txt 18-Aug-2025 19:10 1142
rseqc_bam_stat.txt 18-Aug-2025 19:10 1636
rseqc_infer_experiment_plot.txt 18-Aug-2025 19:10 277
rseqc_inner_distance.txt 18-Aug-2025 19:10 6248
rseqc_inner_distance_plot_Counts.txt 18-Aug-2025 19:10 14086
rseqc_inner_distance_plot_Percentages.txt 18-Aug-2025 19:10 23407
rseqc_junction_annotation_junctions_plot_Events..> 18-Aug-2025 19:10 386
rseqc_junction_annotation_junctions_plot_Juncti..> 18-Aug-2025 19:10 359
rseqc_junction_saturation_all.txt 18-Aug-2025 19:10 1771
rseqc_junction_saturation_plot_All_Junctions.txt 18-Aug-2025 19:10 3161
rseqc_junction_saturation_plot_Known_Junctions.txt 18-Aug-2025 19:10 3161
rseqc_junction_saturation_plot_Novel_Junctions.txt 18-Aug-2025 19:10 3095
rseqc_read_distribution_plot.txt 18-Aug-2025 19:10 961
rseqc_read_dups.txt 18-Aug-2025 19:10 17414
rseqc_read_dups_plot.txt 18-Aug-2025 19:10 19143
samtools-flagstat-pct-table.txt 18-Aug-2025 19:10 1408
samtools-flagstat-table.txt 18-Aug-2025 19:10 1371
samtools-idxstats-mapped-reads-plot_Normalised_..> 18-Aug-2025 19:10 6788
samtools-idxstats-mapped-reads-plot_Observed_ov..> 18-Aug-2025 19:10 6454
samtools-idxstats-mapped-reads-plot_Raw_Counts.txt 18-Aug-2025 19:10 4153
samtools-idxstats-xy-plot.txt 18-Aug-2025 19:10 239
samtools-stats-dp.txt 18-Aug-2025 19:10 1363
samtools_alignment_plot.txt 18-Aug-2025 19:10 271
star_alignment_plot.txt 18-Aug-2025 19:10 579
star_summary_table.txt 18-Aug-2025 19:10 1552