FastQCFastQC Report
Thu 17 Jul 2025
DE-1_raw_2.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameDE-1_raw_2.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences90005528
Total Bases12.6 Gbp
Sequences flagged as poor quality0
Sequence length35-150
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10527611.1696626011682305No Hit
CTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGGCAT1728160.1920059843435394No Hit
CGCTTGAGCCCAGGAGTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGT1170090.13000201498734612No Hit
CTTGAGCCCAGGAGTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCC1153650.12817546051171436No Hit
CTTGAGTCCAGGAGTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCC1094880.12164586157419131No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1029560.11438852955787339No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)